Gene Mvan_2970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2970 
Symbol 
ID4645098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3141218 
End bp3141844 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content70% 
IMG OID639806450 
ProductNLP/P60 protein 
Protein accessionYP_953781 
Protein GI120403952 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.382665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.556546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGCC TCCTCGTCTT CGTGATCGGT CTCGCCCTGC TGCTGGCGAC GCCGGGCTTG 
GCGACGGCTC AGCCCGCTCG GTCGGCCACC AACCAGAAAG CAGTCGAGGC CGTGATCGCG
CGGGCCCTGT CGCAGCGCGG CGTCCCGTTC GCCTACGGCG GCGGCGGTGC GTCCGGACCG
AGCAAGGGCA CCGTCGCGGT GCCCGAAGCA GAGCCGGCGC TGCCGGACCA GGCCGAGGTC
GACGCCCAGT CGCTGGACCT GGCACCCGGA CTCAACGTGC CGAGCGTCAC CCCGAACGTG
GCCGCGCCCA TTCCGGCGCC CACGCCGGCG CCGGCGCCGC GTATCGAGGT GGTCGGTTTC
GACGCTTCAG GACTGATGGT CTACGCGTAC GCCGGCGTCG GCGTGAAACT GCCGAGGTCG
TCCGGCGAGA TGTACAAGGT GGGCCAGAAA GTCCTTCCGG CCCAGGCACT GCCGGGCGAC
CTGATCTTCT ACGGGCCCGA GGGAACGCAG AGCGTCGCAC TGTTCATCGG CAACGGCCAG
ATGGTGGAGA CCACCGACGC CGGCGTCGCC GTGTCGTCGG TGCGTACCAA GGACATGACG
CCGTACCTGG TCCGCATCAT CGCCTGA
 
Protein sequence
MRRLLVFVIG LALLLATPGL ATAQPARSAT NQKAVEAVIA RALSQRGVPF AYGGGGASGP 
SKGTVAVPEA EPALPDQAEV DAQSLDLAPG LNVPSVTPNV AAPIPAPTPA PAPRIEVVGF
DASGLMVYAY AGVGVKLPRS SGEMYKVGQK VLPAQALPGD LIFYGPEGTQ SVALFIGNGQ
MVETTDAGVA VSSVRTKDMT PYLVRIIA