Gene Mvan_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2389 
Symbol 
ID4644586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2546389 
End bp2547048 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID639805873 
Producttwo component transcriptional regulator 
Protein accessionYP_953209 
Protein GI120403380 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.753035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0318145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA TCCTGATCGC CGAGGACGAG CCGCGCGTCT CCAGTTTTGT CCGAAAAGGA 
CTGTCCTCCA ACGGTTATTC GGTGACACTG GTGACCGACG GGCGGTCGGC CTACTTCTCT
GCGCGCAATG GCGGCTTCGA TCTGATGCTG CTCGACACCG ACCTGCCCGG AATGGACGGT
TTCGCCGTGC TGCGGCGGTT GCGTGCCGAC GGCAGCCCGC TTCCGGTGGT GATGCTCATG
TCGCGCGCCG GCGTGGCCGA CACGACGGCG GCGCTCGAGG AGGGCGCCGA CGATTACGTC
GTGAAGCCGT TCCGGTTCGA GGACCTGCTG GCGCGGGTGC GGCTGCGGCT CACCGCGGGT
CGCGCGGCAT CGACGACACT GGCATACGGG AGCCTGTTGC TGGATCTGCG CACCCGCCGC
GCGCATGTCG GTGACTACGC CGTGGATCTG TCGGCGCGCG AATGCAAGCT GGCGGAGACC
TTCCTGCGCC ATCCGGGCCA GGTGCTCTCT CGCGAACAAC TGCTGAACCA GGTCTGGGGG
CGCGACCACG AGACGGGGTC CAACGTCGTC GACGTCTACG TCCGGTACCT GCGCCGCAAG
CTGGGGGCGA ACCGGTTCGC GACGTTGCGC GGCATGGGGT ATCGACTCGA ACCCATCTGA
 
Protein sequence
MTAILIAEDE PRVSSFVRKG LSSNGYSVTL VTDGRSAYFS ARNGGFDLML LDTDLPGMDG 
FAVLRRLRAD GSPLPVVMLM SRAGVADTTA ALEEGADDYV VKPFRFEDLL ARVRLRLTAG
RAASTTLAYG SLLLDLRTRR AHVGDYAVDL SARECKLAET FLRHPGQVLS REQLLNQVWG
RDHETGSNVV DVYVRYLRRK LGANRFATLR GMGYRLEPI