Gene Mvan_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2142 
Symbol 
ID4648813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2286815 
End bp2287924 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content70% 
IMG OID639805627 
Productcystathionine gamma-lyase 
Protein accessionYP_952963 
Protein GI120403134 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.654295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCA CCTATGGAGA TTCCACGAGG AGTGTCAAAG CCGTTGGTGC CGAAGCGATT 
CCAGGACTCC CCGTGTCATC GCCACCGGTT CCTGCGGCCG CTTACCACTT GGCCCCCGAC
GAAGACGGCT CGCTCGACAG CTATGGCCGT AGCTCCAATC CGACATGGCG CCAGCTGGAA
TCGGCGCTGG CAAGGCTCGA AGGTGCCGCC ACCGCACTGG TTTTCGGCTC GGGAATGGCG
GCCCTGACGT CGGTGCTGCG CGTCGTCGCG GAGCCGGGCC ACACCCTCGT CGTGCCCGCC
GACGGCTATT ACCAGGTGCG CGCCTACGCC AAGGAGTACC TCGCCCCGCG CGGGGTCACC
GTCGTCGAGG CGCGGTGCGC GGAAATGTGC GACGCCGCCC GCGATGCGGA CGTGGTGCTG
GCGGAGACAC CGTCGAACCC CGGACTCGAC GTCGTGGACC TTCATCGGTT GGCGATGACC
TGCCGGGCCC AGCGGACCTT GCTCGTCGTG GACAACACCA CCGCCACCCC GTTCGGCCAG
CAGCCGTTGT CGCTCGGCGC CGATCTGGTG GTGGCCAGTG CCACCAAGGC GCTCGCGGGG
CACCACGATG TCCTTGCCGG CTACGTCGCC GGTAGTCAGC CCGAGTTGAT GGAGCGCGTG
CAACGCGAGC GGCTGCACGC CGGGCCGATC CTCGGCGCGT TCGAGGCCTG GCTGGTGTTG
CGCAGCCTCG GCAGCGCCGG GCTGCGCTTC GAACGGCAGT GCCAGAACGC CGCGGCGCTG
GCCCTGATGT TGCGATCTCA CCCGGCCGTC CATACGGTGC GCTATCCCGG CCTGCCCGAG
GACCCTTCCC ATGCCGTCGC CTCGATGCAG ATGCGGCGCT TCGGCGGGAT CGTCGCCGCC
GAGCTGGGTG ACGCGCAGGC CGTACACGAC CTGGTGCGCA GAAGTGCGCT GCTGATCGCA
TCGACGAGCT TCGGTGGCAT CCACACGTCG GTGGACCGCC GCGCCCGCTG GGGCGACCAC
GTCTCCGACG GCTTCGCCCG GATCTCGCTG GGCATCGAGG ACACCGACGA CCTGGTCGAC
GACGTCCGGC AGGCACTCGG AGCCGGATGA
 
Protein sequence
MAGTYGDSTR SVKAVGAEAI PGLPVSSPPV PAAAYHLAPD EDGSLDSYGR SSNPTWRQLE 
SALARLEGAA TALVFGSGMA ALTSVLRVVA EPGHTLVVPA DGYYQVRAYA KEYLAPRGVT
VVEARCAEMC DAARDADVVL AETPSNPGLD VVDLHRLAMT CRAQRTLLVV DNTTATPFGQ
QPLSLGADLV VASATKALAG HHDVLAGYVA GSQPELMERV QRERLHAGPI LGAFEAWLVL
RSLGSAGLRF ERQCQNAAAL ALMLRSHPAV HTVRYPGLPE DPSHAVASMQ MRRFGGIVAA
ELGDAQAVHD LVRRSALLIA STSFGGIHTS VDRRARWGDH VSDGFARISL GIEDTDDLVD
DVRQALGAG