Gene Mvan_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1881 
Symbol 
ID4645751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2008719 
End bp2009480 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content69% 
IMG OID639805369 
ProductNADH dehydrogenase subunit E 
Protein accessionYP_952708 
Protein GI120402879 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID[TIGR01958] NADH-quinone oxidoreductase, E subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.54783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTCT TTCTGGAGTT GGGACAGCGG CCCGACGAGC CGGGTCCCCC GATTCACGGC 
CCTACGGCCT ACCCCGCCGA GGTCACCGAG CGGCTGGCGG CCGACGCCGC GACGATCATC
GGCCGCTATC CGCAGTCGCG GTCGGCCTTG CTACCCCTGC TGCATCTGGT GCAGGCAGAA
GACGGCTACC TCACCCCGGC CGGAATCGCT TTCTGCGCAG GACAACTGGG GCTCACCCAC
GCCGAGGTCA CTGCCGTGGC GACGTTCTAC TCGATGTACC GGCGCGAGCC GACCGGCGAG
TATCTGGTCG GTGTCTGCAC CAACACGCTG TGCGCGGTGA TGGGCGGTGA CGCAATCCTG
GAGAGCCTTG AGAGTCATCT GGACATCGCG CCGGGCCAGA CCACTGCGGA CGGCACGATC
ACACTCGAGC ACGTCGAATG CAACGCCGCG TGTGACTACG CCCCGGTGGT GATGGTCAAC
TGGGACTTCT TCGACAACCA GACCCCTTCT TCGGTACGCG ATCTCGTCGA CTCCCTCCGC
TCGGGTGAGA AGCCGACGCC GTCGCGCAGC GGAGCCCTGT GCACGTTCCG CGAGACCGCG
AGAATCCTTG CCGGGCTGTC AAACCCGGGC GACGCCCCCG ACGCCGGACG CGTGGGAGCG
GCGACGCTGG CCGGGCTGCG GGTCGCGCAG GAGCGCGCCA TGGCGGCACC GGATCACGGT
GCGCCGCCGG ATACCGATCC GAAGGCGGCG GACGACCGAT GA
 
Protein sequence
MSVFLELGQR PDEPGPPIHG PTAYPAEVTE RLAADAATII GRYPQSRSAL LPLLHLVQAE 
DGYLTPAGIA FCAGQLGLTH AEVTAVATFY SMYRREPTGE YLVGVCTNTL CAVMGGDAIL
ESLESHLDIA PGQTTADGTI TLEHVECNAA CDYAPVVMVN WDFFDNQTPS SVRDLVDSLR
SGEKPTPSRS GALCTFRETA RILAGLSNPG DAPDAGRVGA ATLAGLRVAQ ERAMAAPDHG
APPDTDPKAA DDR