| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1300 |
|---|
| Symbol | |
|---|
| ID | 4648434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 1393285 |
|---|
| End bp | 1394721 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639804800 |
|---|
| Product | glucose-methanol-choline oxidoreductase |
|---|
| Protein accession | YP_952140 |
|---|
| Protein GI | 120402311 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0965776 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGTCCG ACGTCCTGAT CGTCGGTGCC GGAAGCGCGG GATCGGTCCT CGCAGAACGG
CTTTCCGCGG ACGACGGCTG CCAGGTGACG GTGGTGGAGG CGGGTCCCGG GCCGTTCGAC
CCCCGGGTGG GCACGCAGAT CACCGACGGG CTCCGGCTGC CGATCGGGGT CGCCAGCTCG
GTGGTCCGCC GCTACCCGAC CGCACTGACC GACGAACCCA GGCGTCACGC GCAGATCATG
CGCGGCGCCG TGGTCGGCGG CTCGGGCGCC GTCAACGGCG GATACTTCTG CCGGGCGTTG
CCGTCGGACT TCGACGGATG GGGCATCGCG GGCTGGTCGT GGGATGAGGT GCTGCCGCAC
TACACCGCCA TCGAGACCGA CCTGGACTTC ACCGGCCCGC TGCACGGGTC CGCGGGCCCC
ATCAGCGTCC GGCGTGTCTC TGAATTCGAC GGCTGCACAG CATCTTTCGT GGAATCGGCG
CGGGAGGCCG GCTTCGGCTG GATCGAGGAC CTGAACGGGT CGACACCGGA GCGGCCGCTG
CCCGCCGGCG TCGGGGCGGT ACCGCTGAAC ATCAACGGCG GCACCAGGGT GGGCCCGGGC
GGCGCTTTCC TGCAGCCGGC GCTGCAGCGC GCCAACCTCA CGCTGGTGAC CGACACCCGG
GTGGGAGGGC TGCGGTTCTC GGCGGGACGG GTTGTCGGGG TGGACTGCCT CGGGCCCGGC
GGGCCGACGA CGCTGGTCGC CGACCGTGTC GTGCTGTGCG CCGGCGCCAT CGCGTCGGCG
CAACTGCTCA TGGTGTCCGG CGTGGGCCCG CAGCAGGTGC TCAGGGCCGC CGGGGTGGCC
GTCCAGATCG ACCTTCCGGT GGGCGTCGAC ACCGTCGACC ACCCGGAGTG GGTGCTGCCG
GTGACGTGGC CCCCGACGCA CGGGGTGCCG CCGCTGGAGG CGGTGCTGAC CACCGGGGAC
GGCCTGGAGA TCCGGCCCTA CACCGCCGGC TTCGGGGCGA TGATGACCGG GCGCCGCGAC
GATCCGACCG ATCAGCCGCA CCTCGGGGTG ACGCTGATGC AGCCGCTGTC GCGGGGCCGC
GTCACCATCA CCTCGGCCGA TCCCGATGCC GACCCGGTCA TCGAGCATCG CTACGACAGT
GAGCCCGCCG ACGTCGAGCT GTTACGGGCG GGAACTCGCC TCGCGCATGA ACTCGCCGGT
GCCACAGTGC AATCCGAGGC ATCTTGGGCG ACATCGCAGC ATCTGTGCGG GACGGCGAGG
ATGGGTGCGG TGGTCGATGC CCGGTGCCGG GTGTACGGGG TGAGCAACCT GTGGGTGGTC
GACGGTTCGA TACTGCCCGC GATCCCCAGC CGCGGGCCAC ATGCGACGAT CGTGATGGCG
GGCCACCGCG CCGCCGAGTT CGTCAGCGCA ACGAGTACCG AACGGGCAGG TGCTTGA
|
|---|
| Protein sequence | MRSDVLIVGA GSAGSVLAER LSADDGCQVT VVEAGPGPFD PRVGTQITDG LRLPIGVASS
VVRRYPTALT DEPRRHAQIM RGAVVGGSGA VNGGYFCRAL PSDFDGWGIA GWSWDEVLPH
YTAIETDLDF TGPLHGSAGP ISVRRVSEFD GCTASFVESA REAGFGWIED LNGSTPERPL
PAGVGAVPLN INGGTRVGPG GAFLQPALQR ANLTLVTDTR VGGLRFSAGR VVGVDCLGPG
GPTTLVADRV VLCAGAIASA QLLMVSGVGP QQVLRAAGVA VQIDLPVGVD TVDHPEWVLP
VTWPPTHGVP PLEAVLTTGD GLEIRPYTAG FGAMMTGRRD DPTDQPHLGV TLMQPLSRGR
VTITSADPDA DPVIEHRYDS EPADVELLRA GTRLAHELAG ATVQSEASWA TSQHLCGTAR
MGAVVDARCR VYGVSNLWVV DGSILPAIPS RGPHATIVMA GHRAAEFVSA TSTERAGA
|
|---|
| |