| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1363 |
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| Symbol | |
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| ID | 4462081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 1459839 |
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| End bp | 1460504 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639700380 |
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| Product | exosome complex RNA-binding protein Rrp4 |
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| Protein accession | YP_843778 |
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| Protein GI | 116754660 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1097] RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.438885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGCA AAATCGTGAT ACCCGGGGAT CTGCTCTCTG AGGACACAAG GAGAGCGGGT
GAAGGCACAT ACGTGAGGAA CGGCAAGGTG TACTCTCTTC TCTACGGGAT TGCCAGCTTC
AGGGACAGGA TCAGCGTGAT CCCCCTTGCA GGCAAGTATA TCCCTGCGGT CGGGGATAAC
GTGATCGGAG TCGTCAAGGA CATAACATTC TCGAACTGGA TTCTGGATAT CAACTCACCC
TACGACGGTC TCCTTCACAT CTCCGAGTTT CCAAAGAAGA TAGATGTCGA GGATATGTCA
AAGTATCTTC GCATAGGCAG CTCGGTCATG GCCAGGGTGA AGGATGTCGA TCCCGCGATG
AAGGTGGAGC TGACCCTGAA CGACAGGAGG CTTGGCGTCA TCAAGACGGG GAGGGTCGTG
GAGATAAGCC ACACCAGGGT TCCGAGGCTC ATAGGAAAGG GCGGTTCGAT GATAAGCATG
CTCAAGAAGG AGCTGAACTG CAACATATTC GTCGGGCAGA ACGGCAGGAT ATGGGTCAGC
GGGAACGAGG AGGATATGGA CCTGGCCTTG AAGACCATAC TCCTGATCGA GAGGGAGGCC
CACACGAACG GCCTCACAGA CAGGATTGTT GAGTACATTA AGGATGCGAG AAGGGCCAGA
GGATGA
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| Protein sequence | MDRKIVIPGD LLSEDTRRAG EGTYVRNGKV YSLLYGIASF RDRISVIPLA GKYIPAVGDN
VIGVVKDITF SNWILDINSP YDGLLHISEF PKKIDVEDMS KYLRIGSSVM ARVKDVDPAM
KVELTLNDRR LGVIKTGRVV EISHTRVPRL IGKGGSMISM LKKELNCNIF VGQNGRIWVS
GNEEDMDLAL KTILLIEREA HTNGLTDRIV EYIKDARRAR G
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