| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1362 |
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| Symbol | |
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| ID | 4462080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 1459097 |
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| End bp | 1459834 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639700379 |
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| Product | exosome complex exonuclease Rrp41 |
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| Protein accession | YP_843777 |
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| Protein GI | 116754659 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR02065] archaeal exosome-like complex exonuclease 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.442066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGAGA GGGTATTCAT AAAGGATGGA ATTCGTCTTG ACGGCAGACG CTTCGATGAG
CTCCGGCCCA TAAAGATGGA GGTTGGCGTG CTCAAAAGAG CCGATGGCTC ATGCTACATG
GAGATGGGTG ATAACAAGGT CATAGCTGCT GTGTACGGAC CGCGGGAGGT CCATCCCAGG
CATCTCCAGG AGGTCAACAG GGCCATAATA AGGTACAGAT ACAACATGGC CTCCTTCTCC
GTGGAGGAGC GGAGGAGGCC CGGACCAGAC AGAAGAAGCT ACGAGCTCTC GAAGGTCAGC
CGTGAGGCCC TGGAGCCTGT GATACTGACC TCATACTTTC CGAAGTCTGT TATAGACATA
TTCGTGGAGG TGCTACAGGC AGACGCCGGA ACCAGGACTG CAGGGATAAA TGCGGCATCT
GTTGCGCTCG CAGACGCGGG CATTCCTATG AGAAGCCTTG TATCGTCATG TGCAGCCGGG
AAGGTTGATG GCCAAATAGT CCTGGATCCC ATGAAGGATG AGGATAACTT CGGCCAGGCG
GACATGCCGA TCGCGATAAC GCCCACCGGC GAGATCACGC TATTGCAGAT GGACGGGATC
TTGACCAGGG ATGAGTTCCG CCAGGCGATG GAGCTCGCGA AGAAGGGGTG CCAGGAGATC
TACAAGATCC AGAGAAGGGT GCTCATAGAG AGATACAGCC AGTTCGAGGA CCTTCAGGAT
GAGGGGAGCA GAAGATGA
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| Protein sequence | MDERVFIKDG IRLDGRRFDE LRPIKMEVGV LKRADGSCYM EMGDNKVIAA VYGPREVHPR
HLQEVNRAII RYRYNMASFS VEERRRPGPD RRSYELSKVS REALEPVILT SYFPKSVIDI
FVEVLQADAG TRTAGINAAS VALADAGIPM RSLVSSCAAG KVDGQIVLDP MKDEDNFGQA
DMPIAITPTG EITLLQMDGI LTRDEFRQAM ELAKKGCQEI YKIQRRVLIE RYSQFEDLQD
EGSRR
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