Gene Mthe_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1053 
Symbol 
ID4463121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1138435 
End bp1139487 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content55% 
IMG OID639700071 
Productrespiratory-chain NADH dehydrogenase, subunit 1 
Protein accessionYP_843477 
Protein GI116754359 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTATTTAT CGACAATCAT AGAGACCGTA TCTGCCTGGG CTGCCCAGGA GCCGAAGATA 
TACGCCCTGG CCATAGGCCT CATAGGGGCT GCCATAATAT CTGCAGTTAT CAACATCGGC
GCCATGGCTG TGGTCTGGCT CGAGAGGAAG TTCCTGGGCG ATATCCAGGC CAGGTTCGGT
CCCAACAGAG TTGGCAGTAG ATGGGGTCTG CTGCAACTGG GTGCTGATGC GATAAAGCTC
TTCACGAAGG AGGACAGCAT ACCCAGAGGC GCGGACAAGC CTGTCTATGT CTGGGCGCCG
ATAATAGCGA GCATAACAAC AATGCTTGTG GCAGCCGCAA TACCCTTCGG CGCGCTGAGG
ATCGACGGGA AGGACTATCC TCTGGTCGTT GCAAACATGG ACATCAGCGC GTTCTATGTT
GAGGCCGCTC TCTCCATAAT GACGATCGCG GTCTTCATGG CGGGCTTCAG CTCCAACAAC
AAGTACTCGA TGCTGGGCGC GTTCAGAGGA ATCGCGAGGA TGATCGCCTA CGAGGTTCCG
ATGGGCGTCT GTGTCATAGC TGTTGCTCTG ATGGCTCACA GTCTCAACCT GGTAGAGATC
GTTGAGAGCC AGACTCTCTG GTACGCATTC GCCCAGCCGC TCGGGTTCAT AGTATTCACC
ATAGCTCTTG TGACGGATCT CGGCAGGATA CCCTTCGACC AGAGCGAGGC AGAGGAGGAG
ATCATAGCCG GATACACAAC AGAGTACGGC GGCATAAGAT GGGGCCTGCT GTATTTCCAG
GAGTACATCA ACATGCTCCT CGGATCGATA CTTCTGGTGC TGCTCTTCCT CGGCGGCTGG
AATGGTCCGA GCATACCCGT GATAACAGTG CTCTCTCCGA TGGTCTGGTT CCTGATGAAG
GTCCTGATAG TGCTGATCTT CCTGATCTGG GTCAGGGGCT CTCTGGTGAG ATTCAGAATC
GATCAGGTCA CGGATCTTGG ATGGAAGTGG ATGCTTCCGC TCTCGCTGGT AAACCTGGCG
TGGGCAGCGT TTGTGGGTCT TTACTTCGCA TGA
 
Protein sequence
MYLSTIIETV SAWAAQEPKI YALAIGLIGA AIISAVINIG AMAVVWLERK FLGDIQARFG 
PNRVGSRWGL LQLGADAIKL FTKEDSIPRG ADKPVYVWAP IIASITTMLV AAAIPFGALR
IDGKDYPLVV ANMDISAFYV EAALSIMTIA VFMAGFSSNN KYSMLGAFRG IARMIAYEVP
MGVCVIAVAL MAHSLNLVEI VESQTLWYAF AQPLGFIVFT IALVTDLGRI PFDQSEAEEE
IIAGYTTEYG GIRWGLLYFQ EYINMLLGSI LLVLLFLGGW NGPSIPVITV LSPMVWFLMK
VLIVLIFLIW VRGSLVRFRI DQVTDLGWKW MLPLSLVNLA WAAFVGLYFA