| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0108 |
|---|
| Symbol | |
|---|
| ID | 4462500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 100270 |
|---|
| End bp | 101157 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639699117 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_842550 |
|---|
| Protein GI | 116753432 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0731] Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTACA TCTTCGGGCC TGTTCTCTCA AGGAGGCTCG GCCTCTCGAT GGGCGTGGAT
CTTCTGCCAC TCAAGACTTG CAGCATGGAC TGCTGCTACT GCGAGATAGG TGCCACGACA
TGTCTGACAA TGCGGAGGGA CCGCTACGTT CCTGAGGAGG CTGTCATCAG AGAAATATCA
CGTGTCTCCA GTGTCGATTT TGACTACCTG ACGTTCGCAG GATCCGGCGA GCCGACGCTT
CACTCAGGCC TTGGGGAGAT CATACGGGCC GCGAGGAAGC AGATCGACAG GCCAATTGCG
GTCATAACAA ACAGCAGTCT TCTCATCTAC AAACATGTCA GGAAGGAGGT GGCTCAGGCA
GATCTTGTTC TTCCCTCTCT CGATGCAGCC ACGCAGGAGA CATTCGAGAG GATAAACAGG
CCTGCTGCGG GATTAAAGAT AGAGGATATC ATCGAGGGGC TGCGGGCATT CAGATCTGAG
TTCGGAGGAG AGATGTGGTT AGAGGTGATG CTCGTTCGGG AGATAAACGA GTCTGATACT
CCGCTGATCG CCAGAGCCGC TGCGGAGATA GAGCCTGACA GAATACAGCT CAACACAGTG
GTCAGGCCGC CAGCGGAGCC CGTGCTGCCG CTGAGGAGAG ATGAGATGCT AAGGATGCTC
CGGCTATTCA AAGGCGCTGA GCTGATACCG GACTGGGACT GGAGTGTGCC GGAGGTGGAG
GAGGAGAGGA TCGCAGATCT CCTTCGCGAA CCCATGACAC TGGAGGAGCT TCGGAGCAAG
TCCGGCCTGA TCTATGAGGA TACCGTGAAG TACCTAAAGA TACTCGAGGA CGCCGGGAGG
ATCTCACGCA GCATCCGCGA TGGGAAGATA TACTTCCAGA CACGTTAG
|
|---|
| Protein sequence | MRYIFGPVLS RRLGLSMGVD LLPLKTCSMD CCYCEIGATT CLTMRRDRYV PEEAVIREIS
RVSSVDFDYL TFAGSGEPTL HSGLGEIIRA ARKQIDRPIA VITNSSLLIY KHVRKEVAQA
DLVLPSLDAA TQETFERINR PAAGLKIEDI IEGLRAFRSE FGGEMWLEVM LVREINESDT
PLIARAAAEI EPDRIQLNTV VRPPAEPVLP LRRDEMLRML RLFKGAELIP DWDWSVPEVE
EERIADLLRE PMTLEELRSK SGLIYEDTVK YLKILEDAGR ISRSIRDGKI YFQTR
|
|---|
| |