Gene Msil_3782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3782 
Symbol 
ID7090710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand- 
Start bp4139624 
End bp4140301 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content61% 
IMG OID643467067 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002364026 
Protein GI217979879 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.608196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGT CCCCGGCCCG GAAATACCGC GCTTCGGAAA AGCGCGAATG CACGCGCCAG 
CAAAACAGCG CCGACATTCA GGCCGCGGCC TGGCGCGTGT TCTGCAACGT TGGAATGGAC 
GCGGCGAATG TACGCGACAT CGTCAAGCTG AGCGGTCTCT CTCCCGGCAC CTTTTACAAT 
TATTTCCGCA CGAAAGAGGC GATCTTCGAA GTGATCGCGC AGGATCTATT TGAGCGGTTG 
CGGATCGAGA CTCGCGCCGT CCGCGCGCGG GCGACGAATG CGGAAGAGTT GCTGTTTCTT 
GCCTATAGTT CTTATCTCGA TTTCGTCCAG TCGATCGACG GCGCAATGGA TTTCATCCAG 
CGCAATCAGC ACTACATCCG CTCGGAGGTC TATCCGTCGA CGGCGATCCA CAGCCTCTCG 
ACCGATCTCG AACGGGATTT GCGGCGCTTC ATCCCCCCGT CCGCCATGTC CGACGAGGAA 
GCCGGGCTGT TCGCCGCCAT GATTATCGCG GCCGGCGCCG AGGCCGTTTT TCGCGCGACA 
CAGCCGCCAG AAATCCGCAT CGAAACGCTG CGCGCGTTCC TGACGAAATT TATGCTGGGC 
GGATTGAACG CATGGCGGCC GGCGGAGGCG CAAGCGGCGT CGCCCGATCG TCGGCCTTCG 
GTCGCCAACG ACGCGTGA
 
Protein sequence
MTTSPARKYR ASEKRECTRQ QNSADIQAAA WRVFCNVGMD AANVRDIVKL SGLSPGTFYN 
YFRTKEAIFE VIAQDLFERL RIETRAVRAR ATNAEELLFL AYSSYLDFVQ SIDGAMDFIQ 
RNQHYIRSEV YPSTAIHSLS TDLERDLRRF IPPSAMSDEE AGLFAAMIIA AGAEAVFRAT 
QPPEIRIETL RAFLTKFMLG GLNAWRPAEA QAASPDRRPS VANDA