21 homologs were found in PanDaTox collection
for query gene Msil_2036 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011666  Msil_2036  photosynthetic reaction center H subunit  100 
 
 		 253 aa  502  1e-141  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_009485  BBta_6411  reaction center protein H chain (photosynthetic reaction center H subunit)  56.42 
 
 		 260 aa  262  4e-69  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_1319  photosynthetic reaction center subunit H  52.33 
 
 		 255 aa  238  5e-62  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.474837  normal  0.244306 
 
 
-
 
NC_007958  RPD_3730  photosynthetic reaction center subunit H  51.82 
 
 		 254 aa  238  5e-62  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0219155  hitchhiker  0.00401595 
 
 
-
 
NC_007778  RPB_3975  photosynthetic reaction centre, H-chain  51.01 
 
 		 254 aa  234  1.0000000000000001e-60  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0176232  normal  0.276586 
 
 
-
 
NC_010725  Mpop_5355  photosynthetic reaction center H subunit  49.02 
 
 		 257 aa  229  3e-59  Methylobacterium populi BJ001  Bacteria  normal  0.356568  normal  1 
 
 
-
 
NC_010511  M446_3724  photosynthetic reaction center subunit H  51.72 
 
 		 261 aa  227  1e-58  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.055841 
 
 
-
 
NC_007643  Rru_A0617  photosynthetic reaction center, H-chain  47.64 
 
 		 257 aa  225  4e-58  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.110547  n/a   
 
 
-
 
NC_010172  Mext_4810  photosynthetic reaction center subunit H  48.24 
 
 		 257 aa  225  6e-58  Methylobacterium extorquens PA1  Bacteria  normal  0.54526  normal  0.0831803 
 
 
-
 
NC_011757  Mchl_5277  photosynthetic reaction center H subunit  48.83 
 
 		 257 aa  221  6e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_1736  photosynthetic reaction center H subunit  52.03 
 
 		 255 aa  219  3e-56  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_1842  photosynthetic reaction center subunit H  46.12 
 
 		 259 aa  219  3.9999999999999997e-56  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0733944 
 
 
-
 
NC_008789  Hhal_1631  photosynthetic reaction center subunit H  47.64 
 
 		 278 aa  212  4.9999999999999996e-54  Halorhodospira halophila SL1  Bacteria  normal  0.768314  n/a   
 
 
-
 
NC_009952  Dshi_3540  reaction center protein H chain  41.73 
 
 		 256 aa  191  1e-47  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_0291  reaction centre H protein  42.39 
 
 		 260 aa  179  4e-44  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.152025  n/a   
 
 
-
 
NC_009049  Rsph17029_1934  photosynthetic reaction center subunit H  42.39 
 
 		 260 aa  179  4e-44  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_1004  photosynthetic reaction center subunit H  42.74 
 
 		 260 aa  177  1e-43  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.61506 
 
 
-
 
NC_007802  Jann_0155  photosynthetic reaction center subunit H  39.84 
 
 		 260 aa  172  5.999999999999999e-42  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_3180  hypothetical protein  30.21 
 
 		 304 aa  47.4  0.0002  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_0474  PRC-barrel domain-containing protein  29.6 
 
 		 142 aa  42  0.009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.903154  hitchhiker  0.00309714 
 
 
-
 
NC_007413  Ava_1656  hypothetical protein  26.72 
 
 		 281 aa  42  0.01  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.236297 
 
 
-
 
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