Gene Ava_1656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1656 
Symbol 
ID3681998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2079891 
End bp2080736 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content39% 
IMG OID637716996 
Producthypothetical protein 
Protein accessionYP_322174 
Protein GI75907878 
COG category[S] Function unknown 
COG ID[COG3861] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02271] conserved domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.236297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTTT ATAAACTTGA AGAATTCGAC CCTAACTACA GAGAAACCTT TGGTGGTGAT 
GACGTTAAAG CTTTAGAACT CTATACCCAA AGTGGAGTGA GAGTTGGAGC GATCGCTGAT
GTCTTAGTTG ATAATGAAGG ACGCTTTCGT TATCTAGTAA TTGACACTCA TATTGATGAT
TCAATTAACA AAAAAATCTT ACTACCAATT GGTCTGTCCC AGATCAATTA TCCAGCAAGG
CGTGTTTATG TTGACGGACT GAGCAAAGAA CAAGTAGAAC ATTTACCTGA ATATCACGAC
AATATTGCAG TTAATGAAGA ATACGAAGAA AAAGTACGCG GTATATTTCG TCCACAGACT
AGTAATTTAA CTTATGACCG TCAGACATAC GACTACCAGC AAGAACCAGC TTTATATAAT
TTGAATGAGC AATATCATCA AACTTTCAGG CTTTACGAAG AAAGATTAAT TGCTAACAAG
CATCGTGTTA AAACCGGTGA AGTAGCTGTT GGTAAACACA TTGAAACAGA AAACGCACGG
GTGGCTGTGC CTATTCAAAG AGAACGTGTA GTGATTGAAA GAGCCGCACC AACATCACCA
GATACGATAG TAGATCCAAA AGAAGTTAAG TTTCAACAAG GGGAAGTGGC GCGCATTGAA
TTGTACGAAG AAACCCCGGA AATTCGGAAA GAAGCTTTTG TCCGGGAAGA AGTCCGGGTA
AGAAAAGTAG TAGAAAGTGA TACCGTTGAA GCCCAAGATG TAATTCGTCG GGAAGAGTTA
GATATTGATA CTGCTGGTAA TTTACTTGTC AATGAAACTA ATGTAGAAAA GCATGAAAAT
GTTTGA
 
Protein sequence
MPLYKLEEFD PNYRETFGGD DVKALELYTQ SGVRVGAIAD VLVDNEGRFR YLVIDTHIDD 
SINKKILLPI GLSQINYPAR RVYVDGLSKE QVEHLPEYHD NIAVNEEYEE KVRGIFRPQT
SNLTYDRQTY DYQQEPALYN LNEQYHQTFR LYEERLIANK HRVKTGEVAV GKHIETENAR
VAVPIQRERV VIERAAPTSP DTIVDPKEVK FQQGEVARIE LYEETPEIRK EAFVREEVRV
RKVVESDTVE AQDVIRREEL DIDTAGNLLV NETNVEKHEN V