| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1851 |
|---|
| Symbol | |
|---|
| ID | 7094130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 2015004 |
|---|
| End bp | 2015729 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643465178 |
|---|
| Product | transcription activator effector binding |
|---|
| Protein accession | YP_002362158 |
|---|
| Protein GI | 217978011 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4978] Transcriptional regulator, effector-binding domain/component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.493771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTTG GCGACTTCGC AGAACTGACG CTTGCGTTTT CGGGGCGCGC TGCTCGCGCC
GCGGCCGCGC TCGCTTTCCT CGCCCTTTTT GCTGCGCCCG CCGCCGCCGA AGCGCCGACG
ACAACGCCGC CTGCAACTGA AGCCGCGCCG CCCGCAACGC CTGACGCCTC GCCTGCCGCC
CCCGAATCGG CGGCTCCCGA CGCGACTGTG CCCGAGCCGG ACCAGAAGGC TGCGCCCGGC
GCTCCGGGCG TCCCCGGCGA CGCCACCGCC GAAACTGTGG AGGTGACCGC CAAGCCCGTC
GCGCTGCTCG TCGGCGACGC GGAATGGGCG GAAGGGTTCA AATCCATCCT CGCCGCGCTC
GACAAGGCGC AGGAGGCCGT CAAGACCGCC GGGCTCAAGC AGGCCGGCCC GCCCTTCGCG
GTGTTTCTAT CGACCGACGA CACCAGCTTC CATTTCGAGG CGATGGTGCC GATCGAGGCC
AAGCCGGACG GCAAGACCGA GCTGACCGGG GGCGTCAAGA TCGGCGATTC GCCGGCCGGC
AAGGCGATCA AATTTTTGCA CCGCGGCGCC TATGACGACA TCGATTCAAC CTATGATCTC
ATCACCGCCT ATCTCGACGA GAAGGGGCTG GATTCCAAGA ATCTGTTCAT CGAGGAATAT
CTGACCCCGA CCCGCGAAAG CGACGACGCG GGGCTTGAGG CCGACATTTA TGTGTTTTTG
AAGTAG
|
|---|
| Protein sequence | MRFGDFAELT LAFSGRAARA AAALAFLALF AAPAAAEAPT TTPPATEAAP PATPDASPAA
PESAAPDATV PEPDQKAAPG APGVPGDATA ETVEVTAKPV ALLVGDAEWA EGFKSILAAL
DKAQEAVKTA GLKQAGPPFA VFLSTDDTSF HFEAMVPIEA KPDGKTELTG GVKIGDSPAG
KAIKFLHRGA YDDIDSTYDL ITAYLDEKGL DSKNLFIEEY LTPTRESDDA GLEADIYVFL
K
|
|---|
| |