| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1006 |
|---|
| Symbol | |
|---|
| ID | 7091834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 1091108 |
|---|
| End bp | 1093012 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643464345 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002361337 |
|---|
| Protein GI | 217977190 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0103184 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATT ACTATCCGCT GCTCGCCAGG GCCGTCGCAG GGCTCGCCGA TCCGACCCCG
CAAGCGCGCA GCGCCATCTA TGACCGCGCC CGCAATGCGC TGCTCGGGCA GTTGCGCCGT
CTCGACCCGC CGATCGCCGA TGAAGAAATC GATCGCGAAA GCGTCGCGCT CGAAGACGCC
GTCGCGCGGC TCGAGGCCGA TTTCACTCCG AAGCCGCCTG AAGCTGCGTC GCCCGAACCC
CCGCCGCCGG AGTTCCACCC GCCGCAGCCT CAGCCCGAGC GCGCGGACAT CGCCGCGGCG
CCGATCGAGC CGACGGTCGC CGAGCGCCCC AATGAGCCAT CCGCGCCGCA TGAGATCGCG
GGCGAACCTT CTTTTGCCGG GACCCCTGAC GCGCCCCATG CGCCGGAAGC GGAACCGCAG
GCGGAGCCTC AGGAGCGCCC GCCTGCCGCA GCGGCGGAGA CGCCGGCGCC GGCTGCTTCC
CCTCCCGGGG AGGGCGCTGA TGACAACGCG GCGCAAAAGA TCAAGGACGA TTCGGCAAAG
CCCGACTTCA GAGCCGGGCG GCCGTCGAGC CTGCAGACGC GCCCGCCGAT GTTCTTCAAA
GCGCGGCGCG ACAAGACGAC CCCGGAGCCG GCGCCCGGCG CGATCCTTCC GCCGCGCCGG
CCGCTGGGAA CGAGTTTGCT GCGCATGCCG CCGCGAGTCC CGGCGGCGCC GGTGGCCGCT
CCCGCGCCAG GATTCACGCC TGAGCCGCCG CCCAAAGCTG AGCCTGCTCC CGAGCCTCTC
CCGGACCAGC CGGCGCACGG GGACGAAAAC GGGTGGCGGG AGCCCGTATT CGAGCCGCGC
GAGGCGGAGC TGCGGCGCTG GGAGATGGAG GGCGAGCCGC GATGGGACGC CCCCGCGCCG
GCTCCCCTCG GTGAGGCGCC GGCGGATGAA TGGGCGCGGT CCGATTTTGC GCCGCCCGCG
CCTGAGGCCG ACGCCCCCGC GCGCGACGAA GGCGGGTCCG ATCCGGCGTC GGCGGCTCCG
ATCCGGCCGC GCGCGGAGGC GCAGCGGCCC TTCGCGCCGC AGCCGCGCCG CGAGGACGCC
GCGCCGCGCC GACTGTGGCT CGTCGGCTTT ATCCTTGGAC TGCTGGTGTT TCTCGTCGCG
ATCGCGGCCT ATCAGCTGCG CGACCGGCCT GAAGAATTGC GGCAGCGCGC CGCCGCGCCG
CTCATCATCC CGGAGCCCGC GCCCAGCGGC AAGATTGTCG ATCGTATTGG CGGCGGCCAG
AACCAGCCGC AAGATTCCGC GGCCGGATCG CCGCCTGCGA CGTCCCCGGC GCCGTCTTCT
GCGGCGCGCG GCGCCCCGAC TGCGGTTGAG CCCGAAACCC AGAGCGCGCG CCGGGCGGCG
CTGCTCGTCG AAGCGCCTGA GGAGCCGAAC AAGGTCAGAA CCTTCCTCGG CGCGGTAAAC
TGGAAAGTCG ATAATGTCAC CAGCGGGCCG AATGACCCGC TGAGCATGGC GGTGCATGCG
ACGGTCGAGA TTCCGGAAGA AAAGCTCGAA ATCGTCATGA CGCTGCAGAA AAACTTCGAC
AGCAGCCTGC CGGCCTCGCA CACAATGAAG ATCCAGTTCA TCGAGGGCGC GGACAGCCCG
CTCGGCTCCG TGCAGCAGAT CAGCGTGCCG CAGATGCGCC TCGAGGACAC GGCGACCGGC
GACGCGCTGA ACGGTGTCCC CGTTCAGATC ACCGACAATA CATTTCTCGT CGGGCTCACA
AGCGGGAGCC CGGAGGCGGG CAATCTCGAT CTGTTGAAGT CGCGCGGATG GATCGACGTG
CCGATCCTCT TGAGCAACGG CAAGATCGCC AAGCTGACGT TCGAGAAGGG TCCCGCCGGC
GACCGCGCGA TCGACGATGC GATCGCCGCC TGGAAGGGGC AATAG
|
|---|
| Protein sequence | MADYYPLLAR AVAGLADPTP QARSAIYDRA RNALLGQLRR LDPPIADEEI DRESVALEDA
VARLEADFTP KPPEAASPEP PPPEFHPPQP QPERADIAAA PIEPTVAERP NEPSAPHEIA
GEPSFAGTPD APHAPEAEPQ AEPQERPPAA AAETPAPAAS PPGEGADDNA AQKIKDDSAK
PDFRAGRPSS LQTRPPMFFK ARRDKTTPEP APGAILPPRR PLGTSLLRMP PRVPAAPVAA
PAPGFTPEPP PKAEPAPEPL PDQPAHGDEN GWREPVFEPR EAELRRWEME GEPRWDAPAP
APLGEAPADE WARSDFAPPA PEADAPARDE GGSDPASAAP IRPRAEAQRP FAPQPRREDA
APRRLWLVGF ILGLLVFLVA IAAYQLRDRP EELRQRAAAP LIIPEPAPSG KIVDRIGGGQ
NQPQDSAAGS PPATSPAPSS AARGAPTAVE PETQSARRAA LLVEAPEEPN KVRTFLGAVN
WKVDNVTSGP NDPLSMAVHA TVEIPEEKLE IVMTLQKNFD SSLPASHTMK IQFIEGADSP
LGSVQQISVP QMRLEDTATG DALNGVPVQI TDNTFLVGLT SGSPEAGNLD LLKSRGWIDV
PILLSNGKIA KLTFEKGPAG DRAIDDAIAA WKGQ
|
|---|
| |