| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0910 |
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| Symbol | |
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| ID | 7093345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 997311 |
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| End bp | 998996 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643464250 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002361242 |
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| Protein GI | 217977095 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.661185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCCA GCTCTTTAGA CGAATTCGCT AAATTCCTCG TAAATAAGAA ACTGCTGTCG
TCCGAGGCGA CGGTCGCGAC CCTCGTCTCA AGCGAGCCGA CCGGCGAGCC GGTCTTACGG
AAAATCTGGG AGGCGACAGA CCTTTCGGCG AATGGATTTG CAGACGAAGT CGCGCATTTT
TATGGCATGC GGCGCCTGAG TCTGCCGGAG CTTGTCGCGG CGAAAGCGCT GACCGACCGG
TTTTCGGCCC GTTTCCTGCG CGAAACGTCG ATCTTTCCGT TCAGGGCCGA GGATGGCGGC
TTAAAGCTCG CCGCCGCCGA TCCAAGCGAC CGCGCCGCCG CGCGGGCGGC GGAGATCGTG
CTCGGCGGAC CGGTCGAGGT CGAGGTCGCC TCTTTCGAAG ATATTGCGAT CATCCTCGGC
GAGCGGATCG GCGCGGATGA GGCCGCCTCG CCCGACGAAC GGCGGCCGAG CGCCAGCGCC
GACGACGACA TTGAAAGCCT GCGCGACCTC GCCAGCGGCG CCCCCGTCGT GCGCGCCGTC
AACGATCTGC TCGAACGCGC CGTCGAGCTC CGCGCCAGCG ACATCCACAT CGAGCCGTTT
CGCAACGGGC TGACCGTGCG CATGCGCGTC GACGGACTGC TGCGGACGGT TCCGGCGCCC
GCCGACGCCC TGCCGCAAGC CCTGCTGTCG CGCATAAAAA TCCTCGCGGG CCTCAATATC
GCCGAACGGC GCCTGCCGCA GGACGGCGCC GCGCGCCAGC GCATCGCAAG GTCCGACATC
GACATTCGCG TCGCGACCAT GCCGACGCAA TATGGCGAAT CCGCTGTGCT CCGCCTCCTG
CCGCAGGATC GCGGCCTGCT CGACGTCGCA AGGCTCGGCC TCTCCGCCGC GGATGAAAAA
ATTTTGATGC GGCTGCTCGA GCTTCCGCAT GGGCTGCTTG TCGTCACCGG CCCGACCGGC
AGCGGCAAGA CGACCTCGCT CGCGACCATG CTGTCGCTCT TGAACCAGCC CTCGCGGAAA
ATCCTGACCA TCGAGGATCC GGTCGAATAT GAATTGCCGG GGGTGAACCA GAGCCAGGTC
AAGGCTGGCA TCGGTCTGAC CTTCGCCACG GCGATGCGCG CCTTCGTGCG CCAGGATCCC
GACGTCATCA TGGTCGGCGA GGTGCGCGAT TCTGAGACGG CGAACATCGC CGTCCACGCC
GCGCTGACCG GCCATCTGGT GTTGACGACG CTGCACACCG AATCCGCGGC CGCCGCCATC
CCGCGTCTGC TCGATCTCGG CGTCGAGGGG TTCTTGCTGA AATCGACGCT GCGGGCGGTG
ATCGCGCAGC GTCTTGTGCG GGTGCTCTGC GAGCGCTGCA AGAAGAAGCG CATTTTGACG
CAGGAGGCGC TGGAGGCCGA TCCGCGGCTC AGCGCGCTCG GCCTTCGTTG CGACGACGCC
ATCTATGAGC CGGTCGGCTG CGAGCGCTGC GGCGGCTTTG GCTATCGCGG CCGTAACGGA
ATCTTCGAGA TCCTCGAGCT CAAGGGCGAG GCCTATGAAC TGGTTGGCCC GCATGCCGAC
GCGCACAGCA TCGACCGCGC CGCCCGCCGC GCCGGCATGA CGACGATGGT CGAGGACGCC
GTCGCCAAAT GCCGATCAGG CGTCACCTCG ACCGCCGAGG TTTTGCGGGT GACCACGATC
CGCTGA
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| Protein sequence | MSSSSLDEFA KFLVNKKLLS SEATVATLVS SEPTGEPVLR KIWEATDLSA NGFADEVAHF
YGMRRLSLPE LVAAKALTDR FSARFLRETS IFPFRAEDGG LKLAAADPSD RAAARAAEIV
LGGPVEVEVA SFEDIAIILG ERIGADEAAS PDERRPSASA DDDIESLRDL ASGAPVVRAV
NDLLERAVEL RASDIHIEPF RNGLTVRMRV DGLLRTVPAP ADALPQALLS RIKILAGLNI
AERRLPQDGA ARQRIARSDI DIRVATMPTQ YGESAVLRLL PQDRGLLDVA RLGLSAADEK
ILMRLLELPH GLLVVTGPTG SGKTTSLATM LSLLNQPSRK ILTIEDPVEY ELPGVNQSQV
KAGIGLTFAT AMRAFVRQDP DVIMVGEVRD SETANIAVHA ALTGHLVLTT LHTESAAAAI
PRLLDLGVEG FLLKSTLRAV IAQRLVRVLC ERCKKKRILT QEALEADPRL SALGLRCDDA
IYEPVGCERC GGFGYRGRNG IFEILELKGE AYELVGPHAD AHSIDRAARR AGMTTMVEDA
VAKCRSGVTS TAEVLRVTTI R
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