| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0453 |
|---|
| Symbol | |
|---|
| ID | 7091184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 497546 |
|---|
| End bp | 498637 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643463783 |
|---|
| Product | lysine 2,3-aminomutase YodO family protein |
|---|
| Protein accession | YP_002360789 |
|---|
| Protein GI | 217976642 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1509] Lysine 2,3-aminomutase |
|---|
| TIGRFAM ID | [TIGR00238] KamA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.284633 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCGA CCGCGAAATC TCTCCGCGCA AAATCCTTGC GCGCAAAAAC CCTGCGCAGC
GCTGACGATC TCGTCGAAGC AGGCCTGGCC TCGGCGCGAC GGCGCGCGGA AATCGAAAGC
GTCGGCGAAA CCTATCCCAT CGCCGTGACG CCGGCCATCG CCGCGCTGAT CGATCGCGAC
GCTCCAAATG ACCCCATCGC GCGCCAGTTC GTGCCCGACA TCGCCGAGCT TTCGCCACGC
CCGGAGGATC TCGCCGACCC GATTGGCGAC GAGGCCTATT CGCCTGTCGA AGGCGTGGTT
CACCGCTATC CCGACCGCGT TCTGTTGAAG CTGCTGCTTG TCTGCCCCGT CTATTGCCGC
TTCTGCTTTC GCCGCGACAT GGTGGGTCCC GGCAAATCGG CGCATCTCTC GCCCGAGGCG
CTCGACGCAG CGCTCGCTTA TATCGCCGCC GACCCGCGCA TCTGGGAGGT GATCCTGACC
GGCGGCGATC CTTTCGCCCT GTCGCCGCGG CGCCTCGCCG AGATTATGGA GCGGCTGGCG
GCGATCGAAC ATGTCAGGAT CGTCCGGGTC CATACCCGGG TGCCCTGCGT CGACCCTGAC
GCGATCGACG CCGCCCTGAT CGCCGCGCTC AAGAAATCGG GCAAGACCAT TTACGTGGCG
CTTCACGCCA ATCATCCGCG CGAATTGACG TCAGAGGCTC GCGCCGCTTG CGCGCGTCTG
ATCGACGCCG GCATTCCCAT GGTCAGCCAG AGCGTCCTGC TCGCGGGGGT CAATGACGAT
GTCGAAACCT TGAGCGCCTT GATGCGCGGC TTCGTCGAGG CGCGCGTAAA ACCCTATTAT
CTGCATCACC TCGATCTCGC GCCGGGCGTC GCCCATTTTC GCGTTGACAT CGAGAAGGGG
CGCGAGCTGA TGCAGCAATT GCGCGGACGC CTCTCGGGCC TCTGCCAGCC GGCCTATATG
CTCGATGTGC CGGGCGGACA CGGCAAATCC CCCATCGGGC CGGATTTCAT CGAGCCGGCC
GGCGCCAACG GCGTTTTTCG CGTGCGCGAT TATCAGGGCG CGACGCACCT CTATCCGCCG
CAAGTTCCTT AA
|
|---|
| Protein sequence | MIATAKSLRA KSLRAKTLRS ADDLVEAGLA SARRRAEIES VGETYPIAVT PAIAALIDRD
APNDPIARQF VPDIAELSPR PEDLADPIGD EAYSPVEGVV HRYPDRVLLK LLLVCPVYCR
FCFRRDMVGP GKSAHLSPEA LDAALAYIAA DPRIWEVILT GGDPFALSPR RLAEIMERLA
AIEHVRIVRV HTRVPCVDPD AIDAALIAAL KKSGKTIYVA LHANHPRELT SEARAACARL
IDAGIPMVSQ SVLLAGVNDD VETLSALMRG FVEARVKPYY LHHLDLAPGV AHFRVDIEKG
RELMQQLRGR LSGLCQPAYM LDVPGGHGKS PIGPDFIEPA GANGVFRVRD YQGATHLYPP
QVP
|
|---|
| |