| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0312 |
|---|
| Symbol | |
|---|
| ID | 7091530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 351414 |
|---|
| End bp | 352382 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643463645 |
|---|
| Product | Sel1 domain protein repeat-containing protein |
|---|
| Protein accession | YP_002360653 |
|---|
| Protein GI | 217976506 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.109575 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGAGGCG CGTGCGCTGT CCTTGCTGCG GGAGTCGCCG CCGCCTTGAT TTGCGGCGCG
AAACCGGGGC CTGCCCAGAC GCTTGATCCA GCGCGAGCGC CGGCGGAGGC GCCCTCTCCA
GCCAAGGCGG ATGACGCGCC GGATCTCGCC TTCGGCGCCT ATCAGCGCGG CTATTACGGA
ACAGCGCTCG CCGAGGCGAT GAGGCGCATC TCAGCCAACC CCCAGGACGC CGCGGCGATG
ACGCTGCTCG GCGAGCTTTA TGCGCAAGGT CTTGCCGTGC GCCGCGATCC GACCGAGGCC
AACCGGTGGT ACAAGCTCGC GAGCGACCGC GGCGACCGCC AAGCCAGTTT CAAACTCGGC
CTCGCCAAGC TCACGGGAGA CGGGACGCCG AAGGATCGCG CCGGCGCCGC GGCGCTGTTC
AAGGCGGCGG CGGAGAAGGG CCACCCCGGC GCGATGTATA ATCTCGGCGT CCTCGCGATC
GACGGCAACG GCGTCGTGTC CGACTTTTCC GGCGCCGCCA AATATTTCGA AACTGCCGCC
AATCTCGGCG ATGGCGACGC CGCTTATGCG CTTGGGATTC TTTATCGCAA CGGCTCCGGC
GTCGAAAAAA GCGACGAACG CGCGGCCTAT TGGATCGCCC GCGCCGCAAA GGCCGACAAT
GTTCCCGGCG AAATCGAATA TGGCATCATG CTGTTCAACG GCGTTGGCGT CGCCAAGGAC
GAGACGGCGG GGGCAAAGCA GTTTCTCAAG GCGGCGGCGC GCGACAATCC CGTGGCGCAG
AACCGGATCG CCCGCATCCT CGCCGCCGGC CGGGGCTTGC CGAAAGATCC GGTCGAGGCG
ATGAAATGGC ATCTTCTCGC CCGCTCGGCC GGGATCAAGG ACGCCTGGCT CGACAGCGAA
ATGGCGAAGC TCTCGCCGAA GGACAAAGAG GCCGTTCAGA CCGCCGTCCG GCAATATGTC
GGGCGGTGA
|
|---|
| Protein sequence | MRGACAVLAA GVAAALICGA KPGPAQTLDP ARAPAEAPSP AKADDAPDLA FGAYQRGYYG
TALAEAMRRI SANPQDAAAM TLLGELYAQG LAVRRDPTEA NRWYKLASDR GDRQASFKLG
LAKLTGDGTP KDRAGAAALF KAAAEKGHPG AMYNLGVLAI DGNGVVSDFS GAAKYFETAA
NLGDGDAAYA LGILYRNGSG VEKSDERAAY WIARAAKADN VPGEIEYGIM LFNGVGVAKD
ETAGAKQFLK AAARDNPVAQ NRIARILAAG RGLPKDPVEA MKWHLLARSA GIKDAWLDSE
MAKLSPKDKE AVQTAVRQYV GR
|
|---|
| |