Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2236 |
Symbol | |
ID | 5104297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 2137531 |
End bp | 2141193 |
Gene Length | 3663 bp |
Protein Length | 1220 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640508129 |
Product | reverse gyrase |
Protein accession | YP_001192298 |
Protein GI | 146304982 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1110] Reverse gyrase |
TIGRFAM ID | [TIGR01054] reverse gyrase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.309719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000091621 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATGCTG ATGAACGACT TCCAGACGTA GTGTATATGG GCTCTTGCCC CAATTGTGGT TCTGACATAA CGTCAGTTCG CCTAGGGAAA GGGAGTGTAT GTGAAAGGTG TTTGGGAGAG GAAATTGATA TAGGGAGTTT GCAACAACTG GTTGAAATAC TACAAAATGC AGGCACCATA AAATCACTAT TGAGAGAGAA GAACATCCTT GAAGAGGAGA GAAAGGTAAT AGATCTATTC AAACGCGTGA TTGGCTCAGA ACCGTTGGGC CCTCAGCGAT CTTGGATTAT TAGGGCACTC CGAGGTGAGA GCTTTCCCAT AATTGCTCCT CCGGGACTTG GGAAAACTAC ATTTGGCATA GTCATGTCAT TGTATTACGC CTCAAGGTCA GAGAAGTCTT TGATGATTTT TCCAACAAGG ACTTTGGTTT CCCAAGTGGT CCAAAAGATT CAGGAAATGG GAAAGTCTCT GGACTTCACT CCTAGATTAG TATATTACGT AAGTGGACTA ACCCAATCTA AAAAGGATGA ATTGAGTAAA TCGTTGGCCG AGGAGGATTT TGATATTTTT ATCTCTACCT CACGTTACGT AATTCAGCAT CTGGATGAGA TAAACAAGAT CAATTATAAG TATCTGTTTG TTGACGATGT TGATGCAGTT CTAAAGTCGG GCAAGAGTTC GCTCACTATC CTGAAATTGA TGGGCTTCAG CGACGAAAAT GTAACAAAGG TAAGGGAGTT ATTGAAGACA TCTAGAGATA ATACTTCATC ATTTGATGAG ATAAGAAAAA TTCGAGAAAG ATTCGCCAAG GACAGGGTAG CTATATTTTC GTCTGCAACA ATTACAAGAA GTAACCCGGT TTTCACTTCC CTAATGGGGT TCAAGCCCGG CGGTGCAACA ATCTATCTCC GGAACGTTAT AGATTCATAT ATCATAGGAA CGGACATAGT GTCTCAAACA GTCGAATTGG TAAAAAGATT AGGGCCTGGG GGCCTGGTCT TTGTCCCAGT GGATAAAGGC TTAAACTTCG CCAGAGAAAT ATCTCAGAAG ATTGATTTCC TCAAGGCTTC TGTGGTTTCT TCCAATACCA CCAAGAAATT AGAAGAATTC GAACAGGGCT CAATTGATGT ATTAATTGGG GTAGCTACCC ATTATGGACT CCTAGTCAGG GGAATAGATA TTCCCTGGAG AGTTAGATAT GCTATCTTCG CTGGGATACC TAAGTTCAGA TTCAAACTTG GAGAGACAAT GCATCCGCTG GCTATGTTGA GAATACTTAC CCTACTTTCT GTTGTTCTTA AGGACCCTGA GATAACTAGG ATCCTCAGAT TCGTGAAATA TAGACTAAGG AGGACCTCAA CTGCGGCTTT AGCCATGTTA GCTAAGGCAG TTAAGGACGG AGCTTTAGAG GATAGAACCA TGATAAGGGC ATATGAGATA GTAAATACTT ATCTGAAGGA CAAAAGGATT GTTGAGGCCA TATCCAAGTT TGGCGATATT TCATTTTCCG GAGATTATAT TTCTATTCCA GATTATCTTA CCTATATACA AGCCAGCGGG AGAACATCAA GACTTTATGG GGGACACCTA ACTACAGGCT TATCTGTTCT TCTTGTGGAT GATATGATCC TCTTTGATCT CTTGAAAAAG AAGCTATCCT TTATTCTGGA TGACATGAAG TGGAATCCCT TGGACCTAGA TAGTCAAAAA ATTGGAGATA GAGATCTTCA GGAAATAGTG AAGCAGATAG ATAAGGAGAG GGCAGAGATC ATAAGAAGAA GGAAGATAGA GCCAATTTCC ATGCCAATGG AGAAAATTAA GACCGTGTTA TTAATTGTTG AATCTCCGAA TAAGGCCAAA ACTATTTCCA ATTTCTTTTC CAGGCCAAGT ATAAGGGATT TTGATGGATT ACGTGTATAT GAAACTGTAA TTGGGGATAA GATATTGATG GTAACTTCAA GCGGTGGTCA TGTATATGAC CTTACCACGA AGGATCTTGG AGTCTACGGA GTTGAAGTAA AAAGTAACGG GGATGTTAAT GTTATTCCCT TCTATAACAC ATTGAAGCGA TGTGAAAATG GTCATCAATT CACCGAATAC GCTGAGGGAG GTAAATGTCC AATCTGTATG TCAACTAACG TGAGAGATAA GAGATCGGCC ATAAATGTTC TAAGAAGGCT AGTGCTTGAA GCCGACGAAG TTCTCATAGG AACAGATCCA GATGTGGAAG GAGAGAAGAT TGCATGGGAT CTATACCTTA ACCTTAAGCC CTTCAACTCG AATATATTTA GGGCCGAGTT TCATGAGGTG ACCAGAAGGG CCATAACTGA GGCGTTGAAC TCGCCCAGAA CTTTCTCTAT CAACATGTTA CGTTCCCAGT TGGTCAGGAG AATAGAAGAC AGGTGGATAG GTTTCAAATT GTCAAATAAA CTCAAAGAGG AATTTTGGAA AGAGTATTGT ACCAAGACGT TGGGTAATAA GGACTGTGAT ACTGAGAATA GGAACCTCAG CGCAGGCAGG GTTCAAACAC CCGTTTTAGG TTGGGTCATT TCCAGGTATG AGGAGTATCT CAGAACAAAG AGGACAATGT ATGTGGCAAA GGCTGGTAAC CTTAACATTC TCATACCTAA GCAACAGGGT ATAAGGAAAA ATTCCAAAAT AAAGATAGTA ATCCAATCAG CTGAGAGAAA ACAGGATACT CTAGGTCCAT TTCCGGCCTA TACTACTGAT ACCTATTTAT CTGACGCTTC TGGGTTCTTC TTCATTTCTG CCCAAGAGGC CATGCGTATA GCCCAAGATC TCTTCGAGAA CGGTCTCATA ACATATCATA GAACAGACAG CACTAGGATA TCCAATGTAG GTATAGGTAT TGCTGAGTCC TATCTCAAGG ATCTCTTGGG TGAAAGGTAT AGGGAGATAT TTGTACCCAG GAGTTGGGGA GAGGGGGGAG CACATGAGGC GATAAGACCG ACAAGACCTT TAAACGGGGA ACAGTTGAGG GCCATGGTAG AGCAAGGTGA AATAGAGCCA TCGAAACGCC TTACTTATAA CCATTACAGA TTATATGACA TGATATTCAG GAGATTCCTA TCAAGCCAAC TTGTTCCACT AGTCGTAGAG AAGGAAATAT TGCAGATATC CGCTAAAAAG GGTGATGAGA CTTTGAAATT AGAGAGTGAT ACCCTTGAAA TTGTGACCAA TGTCAGACTT TCCAAGGATG TTCCAATTCC TTCCGAGATC CTCTACATTC CTTTCAGATC TATTGGGGAA ACTCTCCTTA CACAAATTAA GGATAAACTT CCAGCAGAAA TTGACGCAGT TATAACGAGC TCCTTCCAGA AAAGCGATCA TGCACTTTAT ACTCAGGGTG AATTAGTATC CTTGATGAAG CAAAGAAAAA TTGGGAGACC CAGCACTTAC GCATTTATTA TCTCTACTCT CCTAAAAAGA GGTTACGTCT TTGAGACCAT GAAGGTGAAG AGACTGATAC CCTCTAAGTT AGGTCAGCAC GTTTATGAAT TCCTGAACTC TAGGTATTCT AATTTCGTCT CAGAGGACAG AACAAGATCA CTCCTTGAAA GAATGGATCT CATTGAGGAA GGGAAGGAGG ATTATAGGCA AGTATTAAAG CAATTGTACA ACGAAATACA GGACATAAGG TGA
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Protein sequence | MNADERLPDV VYMGSCPNCG SDITSVRLGK GSVCERCLGE EIDIGSLQQL VEILQNAGTI KSLLREKNIL EEERKVIDLF KRVIGSEPLG PQRSWIIRAL RGESFPIIAP PGLGKTTFGI VMSLYYASRS EKSLMIFPTR TLVSQVVQKI QEMGKSLDFT PRLVYYVSGL TQSKKDELSK SLAEEDFDIF ISTSRYVIQH LDEINKINYK YLFVDDVDAV LKSGKSSLTI LKLMGFSDEN VTKVRELLKT SRDNTSSFDE IRKIRERFAK DRVAIFSSAT ITRSNPVFTS LMGFKPGGAT IYLRNVIDSY IIGTDIVSQT VELVKRLGPG GLVFVPVDKG LNFAREISQK IDFLKASVVS SNTTKKLEEF EQGSIDVLIG VATHYGLLVR GIDIPWRVRY AIFAGIPKFR FKLGETMHPL AMLRILTLLS VVLKDPEITR ILRFVKYRLR RTSTAALAML AKAVKDGALE DRTMIRAYEI VNTYLKDKRI VEAISKFGDI SFSGDYISIP DYLTYIQASG RTSRLYGGHL TTGLSVLLVD DMILFDLLKK KLSFILDDMK WNPLDLDSQK IGDRDLQEIV KQIDKERAEI IRRRKIEPIS MPMEKIKTVL LIVESPNKAK TISNFFSRPS IRDFDGLRVY ETVIGDKILM VTSSGGHVYD LTTKDLGVYG VEVKSNGDVN VIPFYNTLKR CENGHQFTEY AEGGKCPICM STNVRDKRSA INVLRRLVLE ADEVLIGTDP DVEGEKIAWD LYLNLKPFNS NIFRAEFHEV TRRAITEALN SPRTFSINML RSQLVRRIED RWIGFKLSNK LKEEFWKEYC TKTLGNKDCD TENRNLSAGR VQTPVLGWVI SRYEEYLRTK RTMYVAKAGN LNILIPKQQG IRKNSKIKIV IQSAERKQDT LGPFPAYTTD TYLSDASGFF FISAQEAMRI AQDLFENGLI TYHRTDSTRI SNVGIGIAES YLKDLLGERY REIFVPRSWG EGGAHEAIRP TRPLNGEQLR AMVEQGEIEP SKRLTYNHYR LYDMIFRRFL SSQLVPLVVE KEILQISAKK GDETLKLESD TLEIVTNVRL SKDVPIPSEI LYIPFRSIGE TLLTQIKDKL PAEIDAVITS SFQKSDHALY TQGELVSLMK QRKIGRPSTY AFIISTLLKR GYVFETMKVK RLIPSKLGQH VYEFLNSRYS NFVSEDRTRS LLERMDLIEE GKEDYRQVLK QLYNEIQDIR
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