| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2089 |
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| Symbol | |
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| ID | 5105069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2008927 |
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| End bp | 2012385 |
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| Gene Length | 3459 bp |
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| Protein Length | 1152 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507979 |
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| Product | hydrogenobyrinic acid a,c-diamide cobaltochelatase |
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| Protein accession | YP_001192153 |
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| Protein GI | 146304837 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
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| TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGG ATAGGAAATT AGCCATCCTC ATAGGCTGGA ACGGTTCTGT GATAAGAACC
TTCGTGGAGA AGGCCCAGGA ACTGGGAGTC GAGTTAAGGA TCAAATATCC CAGGCTGGAT
CCCATCGACG ATAACTTCAT GAGATTTCTT GAGAGCGCTG ACGTGGTCTT CATTCACCAC
TTCTCGAGCG AACAGCTTTA CCAGGAAATA ATGGAGAAGC TTTCCCCAAT CCTGAGAAGA
AAGGAGGTCG TGGTGGTCGT AGATCCTGCG TTAAGTAACT ACAACAAGGC TCCTCCAGAG
GCCCTTGGGA AGGTATCGGC TTACTATTCG TATGGCGGAG AGGTAAACAT CAAGAATCTC
ATTCTTTACC TGCTTAGTCT AAAGTATCCT GACATCACCG CACAGGAGCC TAAACCACTC
CCCTTCTCGG GGATATACCA CCCGAGGTTC GCAGAACCCT TCAGTGAAGT GAGGGACTTT
CTAGATAGGG TTGGTGATTC TGGGAAAAGG GTGGGAATTC TCTTCTACAG GACAGCCTGG
ACTGACAGGG ACCTGGGCGT GGTTGATGCA ATAATTTCAA GTTTGGAGAG GCACGGAATC
ACCCCTATAC CAGTTTTCGT GCAAGGATTT GGGAGCAAGG ATAGGGGAAT AGAGGGAAAT
GACGAGGCGA TTCAGAGGTA CTTCATGATT GATGGGAAGC CCATAGTGGA CGCGGTGATA
AGTCTTCTAT CCTTTTCCCT TATCAAGAAC TGGGATTCCA CTATCCTTCA AAGGCTAAAC
GTTCCCGTGT TCCAAGGAGT TATAGATTAT TACAAGACTG AGAACGAGTG GCTCTCCTCC
AAGGGTCTAG ATCCCATAGG AACCATGATG AGCGTCATGA TGCCGGAGCT CAACGGGACC
ATAGAACCCA TCCTAGTGGG AACGATAAAG GTTGTTAAGT CTGGCAACTA CACCTACAGG
ATTTTGAGCC CTGCGAGGGA TCAAGTTGAG TACCTGGTTT CCAGGGTAAG GAGATGGATA
GACCTCAGGT ATAAACCTAA CAGCGAGAAA AGAATTGCCA TCATCCTCCA TAGCGCCTCA
GCATACAAGG ACCTGGAGGC AAACATAGGC ACTGCCACGG GATTGGATAC GCTACAGACG
ACCGTTGAGA TCATGCACCT CCTGAAGAGA CGTGGATATA CCGTGAAGGA TCTTCCCTCT
AGTGGGGAGG ATTTGGTCAA GCAAATCATA TTGAGCAGGG CCTTTCCAGA AACTAGGTGG
AACTCCCTCG AGGATATCCT CAGGGCTGGC ACAGCTGGAA CCCTTAGCTA CAAAGACTAC
ATGGAATTAT TCAGTACCCT CCCTGAAGAG GCCAGAAAGA GGGTGATTGA AACCTGGGGA
GAGCTGAAGC CTGGAACCAG GGAATACATG TTTGACGGCG AGAAGTTCAT CATACCTGGT
CTCGTTTTCG GCAACGTGTT TGTGGGGGTT CAACCAAAGA GGGTTACGTG GCAGGACGAG
GAGAACGCGA TCAGGTTAGT TCATAACTCT GATCTGCCGG TTCCCCACTT CTGGTTAGCC
TTCTACAGGT GGATAGCTAA GGGATTTGGG GCTGATGTGA TAATCCATGT GGGGACTCAC
GGTACCTTAG AGTTTACGCC CGGTAAGGGG GTGGGATTAT CCCCTGCCTG CTTCCCACAA
ATTTCCGTGG GCGAGTTACC CCACCTTTAC ATATATTCCA TGAACGTGCC TGGGGAGGGC
ATAACTGCAA AGAGGAGAAG TTACGCAGTT CTAGTGGATC ATCTCTCTCC TCCCACCATG
TTCGATGAGA TACCTGAAGA AGCTAGGAAA CTAGAGGACA TGATAGAGGA ATACGAGGAG
GCGGAAAGGG CGGATAACGA GGTTAGGCAG AAGCTGGTAC TTAACAAGAT CAAGGAGACC
GCTGAGAAGA TAGGGTTGAC AGTGGACTTC ACTGATCCAG ATAAGGCCAC ACACGAGATC
GAGCACAGGC TCAACATCTT TAAGGATTCA ACCATCTCCA AGGGACTTCA CGTACTGGGG
GATGTGCCGT CTGAGGAGGA CTTAGCGGAA TATGTTGTTA CGGCGACGAG ATTCGAGGAG
GATTCCTTGG TAAAGACATA TGGTAGGGAG AAGGCTAAGG AGATGGTGAT CAGTGCCATT
CAAGGCCAAA CTAAGTTACC CGAAAAGGAG AATTACGTCC TCACCAAGGT TCTCGAGTCC
GTGAACCTGG AGAGGGAAAG TCTAATGGAG GCGCTAAATG GGAGATTTGT GGAGCCTGGT
CCATCGGGCT CAATTACCAG GGGAAGGTAT GACGTCCTCC CCACTGGGAG GAACTTCTAT
GCAGTTGACC TTTGGAAGAT ACCAACGCAG TCGGCCTGGC AAACGGGTGC CTTGTTAGCT
GAGAAACTGA TAGATACTTT CTACAGGAAG AACGGCAGGT ATCCAAGGGC AATAGGCTTC
ATACTCTGGT CAACTGACGT TTTCAGATCA GACGGAGAGC TAGTGGCCCA AATTCTCAGG
ACCCTGGGCG TGACACCTGT GTGGAACCCC ATAACCAAGA GGGTTCAGGG AGTTAAACCA
ATACCATTAG ATGAACTCCA GAGACCTAGA ATTGACGTGG TAATCAACGT TAGCGGTATC
GTGAGAGATA ACCTAATGAA CATCGTGGAG CTGTTGGACG AGGCAACGCA ATTGGTATCC
TCCCTTAACG AGCCAGAAAG CCTTAATTAT CCAAGGGCCA ACTCCCTCAA ATATCACGTG
TTCTCAGCTA AGCCAGGGGC TTACGGTTCT GGGGTGAGCC ACGCCATAGA GTCTGGGGTG
TGGAACCAGG AATCGGAGCT TGGGGACGTA TACCTTGACT GGTTAGGATA CGCATACGGG
AAAGGGAAGA ACGGTATAAG GGCCACAGAC TCGTTGAAGA GGGCCATTGA GAACGTGGAA
ATGATAGTCC ACAAGAGGGA GATAGACGAG ATAGACATCC TGGACGATAG CTGTAACTAC
AGCTACGTGG GAGGGCTCTA CCTAGCTTGT AAGAAGATAG GCAGGAACCC TGAGCTGATG
TATGAGGATA CCTCCAATCC TAACAGGCCT CAGCTTAGGC TGTTCAGGGA GGAGATAGAG
AGGGTAAGCA TTGGAAAGCT TCTCAACGAC TCATGGCTTA ACTCGCAGAT GAGGTTTGGG
TACAGGGGAG CCACAGAGAT CCTCAAGAAA GTTGAGCATC TTTATGGATG GGCAGCTACC
ACTAGACTGG TAAATGATCA GATCTTCAAT AACGTTGCCT CCAAGATAGT GTTGAATGAA
CGAATGAGAA ACTGGTTCAA TGAGGTTAAT CCATACGCCC TCGAGGAGAT AACGAGAAGG
CTGATAGAGG CAAAAAACAG GGGCATATGG AGGCCTTCAA AGGAGATTGA CAAGCAACTG
TTAAACGTTT ACTCGCAGAT AGAGGGAGAG CTAGAGTGA
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| Protein sequence | MIQDRKLAIL IGWNGSVIRT FVEKAQELGV ELRIKYPRLD PIDDNFMRFL ESADVVFIHH
FSSEQLYQEI MEKLSPILRR KEVVVVVDPA LSNYNKAPPE ALGKVSAYYS YGGEVNIKNL
ILYLLSLKYP DITAQEPKPL PFSGIYHPRF AEPFSEVRDF LDRVGDSGKR VGILFYRTAW
TDRDLGVVDA IISSLERHGI TPIPVFVQGF GSKDRGIEGN DEAIQRYFMI DGKPIVDAVI
SLLSFSLIKN WDSTILQRLN VPVFQGVIDY YKTENEWLSS KGLDPIGTMM SVMMPELNGT
IEPILVGTIK VVKSGNYTYR ILSPARDQVE YLVSRVRRWI DLRYKPNSEK RIAIILHSAS
AYKDLEANIG TATGLDTLQT TVEIMHLLKR RGYTVKDLPS SGEDLVKQII LSRAFPETRW
NSLEDILRAG TAGTLSYKDY MELFSTLPEE ARKRVIETWG ELKPGTREYM FDGEKFIIPG
LVFGNVFVGV QPKRVTWQDE ENAIRLVHNS DLPVPHFWLA FYRWIAKGFG ADVIIHVGTH
GTLEFTPGKG VGLSPACFPQ ISVGELPHLY IYSMNVPGEG ITAKRRSYAV LVDHLSPPTM
FDEIPEEARK LEDMIEEYEE AERADNEVRQ KLVLNKIKET AEKIGLTVDF TDPDKATHEI
EHRLNIFKDS TISKGLHVLG DVPSEEDLAE YVVTATRFEE DSLVKTYGRE KAKEMVISAI
QGQTKLPEKE NYVLTKVLES VNLERESLME ALNGRFVEPG PSGSITRGRY DVLPTGRNFY
AVDLWKIPTQ SAWQTGALLA EKLIDTFYRK NGRYPRAIGF ILWSTDVFRS DGELVAQILR
TLGVTPVWNP ITKRVQGVKP IPLDELQRPR IDVVINVSGI VRDNLMNIVE LLDEATQLVS
SLNEPESLNY PRANSLKYHV FSAKPGAYGS GVSHAIESGV WNQESELGDV YLDWLGYAYG
KGKNGIRATD SLKRAIENVE MIVHKREIDE IDILDDSCNY SYVGGLYLAC KKIGRNPELM
YEDTSNPNRP QLRLFREEIE RVSIGKLLND SWLNSQMRFG YRGATEILKK VEHLYGWAAT
TRLVNDQIFN NVASKIVLNE RMRNWFNEVN PYALEEITRR LIEAKNRGIW RPSKEIDKQL
LNVYSQIEGE LE
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