| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2070 |
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| Symbol | |
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| ID | 5105050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1987398 |
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| End bp | 1988906 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507960 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001192134 |
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| Protein GI | 146304818 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATTC CCAAGGACAA GTCCAGTGAA GGCAAGGATT ATGATCTGAA ATACGCATAT
AGGGCTTTGG GCATTCTGGC TCCCTTAGCC ATAGTTGTGA TGTATACAGA AGGAATGTTG
ATTCCCTCCC TTGTGAAAAT CGAAGATGAC TTTGGGGTCA ACGCTGCCCA AGTTAGCTGG
GTTCTAACAG TGTATCTCCT TACAGGATCG GTCATGAATC CCATAGCAGG GAAACTGGGA
GATATGTTTG GGAAGAAAAG AGTCCTTACC ATGATCATCT GGATTTACGC TGTGGGTGTT
ACCTTGACAG GATTTGCACC GAGTTTCGGC TTCCTGATAT TTGCTAGGGC TATTCAGGGA
CTAGGTCTTG CCATGTTTCC GTTAGCGTTC AGCCTAATAA GGGAAGAGTT CCCTCCAAAA
CTAGTTCCTA CTGCTCAAGG TATAGTTAGC GCCATGTTTG GGGCAGGATC TGCAATAGCC
CTTCCCATAG GTGCATACAT TTCACAAAAT TTTGGATGGC AGTATACATA TCACACTGTT
ATACCATTCG TGGCCCTGAT GGCAATACTG ACCTCCACAC AGATAAGGGA GTCTAAGTTC
AAGAACCCGA ATACCAAGAT CGACTTCGTT GGAGCAGGAG TACTCTCGAT CTCGTTGGCC
TCCTTAATCC TAGGTTTCAG CGAGGCTCCT AGCTGGGGTT GGTCATCACC CCTTACCATA
GGCACCCTTC TCCTCTCCAT GATCACTTTT GCCACGTTCA TCTATCTTCA GACTATTACG
CCATTTCCAT TAATATCCGT GAAGCTATTG AAGAGAAGAA ACGTTCTTGT CGCTAACGTG
GCCGCAGTGG TTGCAGGATT TGCAATATTT ATGGGGTCCC AAACCTTAAC TTACTTGTTT
GAGGAGCCTA ATCCAGTTGG GTTTGGGCTA GATATCCAGG CAACGGGGCT TGCCCTACTA
CCCACAGCTC TTATCCAGTT AGTGGGAGGC CCCCTCGCAG GAAAGGCAAT ATCTAGAAGC
GGACCAAGAA AAGTGATGAT AGTTGGTTCC ACTGCACTAA TTCCGGTGTA TCTAGTTCTT
TCAGTGTTAA CGTCCGCTGG GGGATCACAG TCAATTAACC TTGTGATTAC CTTCGCCACT
TTGGCAATGT TAAGTGCCAC GCTTCTGAAC GTGAGCCTGG TAAACCTACT CACCTTTTCC
GTGGAGAGGC AGGTCATGGG GACAGTCACT TCAATTAATA CAGTCTTCAG GTTGGTAGGA
GGAACCATAG GTCCATCTGT AGCCGGAGCT ATTATGGGGA CTTATCAAAG CAGTATCGTG
GAGATCATAC CGGTAGGAGG AACTACGGTC TACTACCCGG TCATCATTCC TTCGGACCAG
GCCTTTAGTC TTATTTATCT GATTGCAACT CTTCTGGCTG TAGTTATGAC TGGGATTTCC
TTCATGACTA AGGACATAAA AATTGGGAAT GTAATGAAGG AAAGAAATGA GTTCGTTGCA
GGACATTAG
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| Protein sequence | MEIPKDKSSE GKDYDLKYAY RALGILAPLA IVVMYTEGML IPSLVKIEDD FGVNAAQVSW
VLTVYLLTGS VMNPIAGKLG DMFGKKRVLT MIIWIYAVGV TLTGFAPSFG FLIFARAIQG
LGLAMFPLAF SLIREEFPPK LVPTAQGIVS AMFGAGSAIA LPIGAYISQN FGWQYTYHTV
IPFVALMAIL TSTQIRESKF KNPNTKIDFV GAGVLSISLA SLILGFSEAP SWGWSSPLTI
GTLLLSMITF ATFIYLQTIT PFPLISVKLL KRRNVLVANV AAVVAGFAIF MGSQTLTYLF
EEPNPVGFGL DIQATGLALL PTALIQLVGG PLAGKAISRS GPRKVMIVGS TALIPVYLVL
SVLTSAGGSQ SINLVITFAT LAMLSATLLN VSLVNLLTFS VERQVMGTVT SINTVFRLVG
GTIGPSVAGA IMGTYQSSIV EIIPVGGTTV YYPVIIPSDQ AFSLIYLIAT LLAVVMTGIS
FMTKDIKIGN VMKERNEFVA GH
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