Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2037 |
Symbol | |
ID | 5105259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1962800 |
End bp | 1963786 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640507927 |
Product | GTPase or GTP-binding protein-like protein |
Protein accession | YP_001192101 |
Protein GI | 146304785 |
COG category | [R] General function prediction only |
COG ID | [COG1341] Predicted GTPase or GTP-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.677011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGTTT ACCCTAACCA GTACGTGATC ATGAGGGGCC CGTGCGAGCT TAGGGTAACT GGTGGAGAGA TCAGGATAAT GGGGCTAAGC CAAGATCTTT ACCTTATTCC AGATACCACG TTTACAGTAT ACAGCAGAAA GGGGGCGGAG ATAGAGTCCG ATTGCGAGTC ACTCGCCACG TTGCCAACAA CGGGATGGGA AGAAGTTGCA GAGCTCATAT CCCTGACGGG CGGAAGGGTT ATCGTGATTG GGGACTTGGA TTCTGGCAAG AGCTATTTTT CTAGGACTCT CTACAATATG GCAAAGGACT TTGCTTACGC TGACCTGGAT CTGGGTCAGT CGAGTCTCTT TCTTCCAACA TTCATGTCCA TGACACAAGG AAGTAAGCTC TGGTTTCATA ATCCGCTATC CTTCACTAGG GCTGAGTTCT TTGGGGACAT TTCCCCGTCT CGAGATCCTA ACCTTCACCT TGAGCTCTCC CTCAGGCTAG TCAAAGACAT CAGGAACATT GTTGTGGACA CCGACGGCTG GATTAGGTCT TCAGGGGTGT GGCACAAGAG AAAACTGATC GAGCTCTTGG ACCCTGATTA CGTCGTAGCT TTAGGCGTAG ATGCGCTAAG GCTTATGCCG AGGAATTACA GACAGAGGAC CTTCCTACTC AAGCCAGTTC AAATTAGGCG AAAGAAGACA AGGACTGATA GACGTGCCAA CAGGAGATCA CTTTACGAGA GATATTTTGC GTGGGCTAAG GAAGTAAGCG TTAGCAGTTT CGGCAGGAGG ATAGGGTTGA CAGGAAGCTC CTGTTACCTT CACGATCATC TTAACGGCCT GATGGTTGGG ATTATCTCCG GAGGTAAGAT AGTAGGTGCG GGCCTCATGA AGATGGAGGA AGGACCTTCC ATTAAAACAC CTGTGTCCAG CTTTGACGAT TTCGTTTTGG GCTTTGTGTC TGTAGACGCG GAGTGGACGG AACGTAGATT GTTCTAG
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Protein sequence | MRVYPNQYVI MRGPCELRVT GGEIRIMGLS QDLYLIPDTT FTVYSRKGAE IESDCESLAT LPTTGWEEVA ELISLTGGRV IVIGDLDSGK SYFSRTLYNM AKDFAYADLD LGQSSLFLPT FMSMTQGSKL WFHNPLSFTR AEFFGDISPS RDPNLHLELS LRLVKDIRNI VVDTDGWIRS SGVWHKRKLI ELLDPDYVVA LGVDALRLMP RNYRQRTFLL KPVQIRRKKT RTDRRANRRS LYERYFAWAK EVSVSSFGRR IGLTGSSCYL HDHLNGLMVG IISGGKIVGA GLMKMEEGPS IKTPVSSFDD FVLGFVSVDA EWTERRLF
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