| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1456 |
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| Symbol | |
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| ID | 5104826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1424552 |
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| End bp | 1426537 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507344 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001191537 |
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| Protein GI | 146304221 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTATGC GATATATTAT GGTTGAGGAA CAGACCCTGA AGACCGGGTC ACAGGAACTA
GAGGAGAAGG CAGACTATAA CATGAGATAT TACGCTCACC TCATGAAGTT GAGTAAGGAA
AAACCTGCAG AGTTCTGGGG ATCTCTAGCA CAGGACCTGC TAGACTGGTA TGAGCCTTGG
AAGGAGACCA TGAGACAGGA AGACCCGATG ACAAGGTGGT TCATAGGAGG TAAGATAAAT
GCCTCGTACA ACGCTGTCGA CAGACACCTC AACGGCCCCA GAAAGTTCAA GGCTGCGGTC
ATCTGGGAAA GTGAGTTAGG GGAAAGGAAG ATCGTGACGT ATCAGGACAT GTTCTATGAG
GTTAATAGGT GGGCCAATGC GCTCAGATCC CTAGGAGTTG GTAAAGGGGA TAGGGTGACC
ATATACATGC CCCTGACCCC AGAGGGAATA GCTGCAATGC TGGCCTCGGC CAGGATAGGT
GCAATTCATA GCGTAATATT TGCCGGCTTT GGTTCGCAAG CCATAGCCGA CAGGGTTGAG
GACGCCAAGG CGAAGGTAGT GATCACTGCT GACGCCTATC CCAGAAGGGG AAAGGTTGTG
GAGTTAAAGA AGACTGTCGA CGAGGCCTTA AACTCCCTTG GAGAAAGGAG CCCAGTACAG
CACGTGCTCG TGTATAGGAG GATGAAAACG GATGTAAACA TGAAGGAGGG AAGAGACGTT
TTCTTCGACG AGGTCGGCAA GTACAGGTAC GTGGAGCCTG AAAGGATGGA CTCCAATGAT
CCACTCTTCA TTCTCTACAC CTCTGGGACC ACCGGTAAAC CTAAGGGAAT TATGCACTCT
ACCGGTGGTT ATCTGACCGG GACAGCCGTT ATGCTACTGT GGAGCTACGG CCTTAGCCAG
GAGAACGACG TTCTCTTCAA CACCTCAGAT ATTGGTTGGA TAGTTGGCCA CTCCTACATT
ACCTATTCCC CCCTTATCAT GGGGAGAACG GTTGTCATTT ACGAGAGCGC CCCAGACTAT
CCCTACCCAG ACAAGTGGGC TGAGATTATT GAGAGATACA GGGCAACCAC TTTCGGCACC
TCAGCTACAG CCTTGCGTTA CTTCATGAAG TATGGGGACG AATACGTGAA GAACCACGAT
CTCTCGTCCA TCAGGATAAT TGTGACGAAC GGGGAAGTGC TTAACTACTC TCCGTGGAAG
TGGGGGCTAG AAGTGTTAGG TGGAGGAAAG GTATTCATGT CCCATCAGTG GTGGCAAACT
GAGACAGGCG CACCGAACCT GGGCTACCTT CCGGGTATAA TTTACATGCC AATGAAGTCG
GGTCCAGCCT CAGGCTTCCC TCTACCCGGT AACTTCGTGG AGGTTCTGGA CGAGAACGGA
AATCCCTCTG CCCCTAGAGT GAGAGGATAC CTTGTAATGA GGCCACCCTT CCCGCCTAAC
ATGATGATGG GGATGTGGAA CGATAATGGG GAGAGGTTGA AGAAGACGTA CTTTAGCAAG
TTCGGTTCCC TGTATTATCC AGGAGACTTC GCCATGGTGG ATGAGGATGG ATACATCTGG
GTGTTGGGTA GGGCAGACGA GACTCTAAAA ATTGCAGCCC ACAGAATTGG AGCTGGGGAA
GTGGAATCAG CAATCACTTC TCACCCATCG GTTGCCGAGG CAGCAGTCAT AGGCGTGCCA
GACTCAGTGA AAGGAGAAGA GGTTCACGCG TTCGTTGTGC TAAAGCAAGG TTACGCTCCT
TCCTCTGAAC TGGCTAAGGA CATACAGTCA CACGTTAGGA AGGTCATGGG GCCCATTGTT
AGTCCGCAGA TTCATTTCGT GGATAAGTTG CCTAAGACAA GGTCTGGGAA GGTCATGAGA
AGGGTGATAA AGGCAGTGAT GATGGGTTCG AGTGCTGGCG ACTTAACCAC CATAGAGGAC
GAAGCATCAA TGGACGAAAT AAAGAAGGCT GTCGAGGAAC TAAAGAAGGA GTTAAAGACC
TCCTAG
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| Protein sequence | MFMRYIMVEE QTLKTGSQEL EEKADYNMRY YAHLMKLSKE KPAEFWGSLA QDLLDWYEPW
KETMRQEDPM TRWFIGGKIN ASYNAVDRHL NGPRKFKAAV IWESELGERK IVTYQDMFYE
VNRWANALRS LGVGKGDRVT IYMPLTPEGI AAMLASARIG AIHSVIFAGF GSQAIADRVE
DAKAKVVITA DAYPRRGKVV ELKKTVDEAL NSLGERSPVQ HVLVYRRMKT DVNMKEGRDV
FFDEVGKYRY VEPERMDSND PLFILYTSGT TGKPKGIMHS TGGYLTGTAV MLLWSYGLSQ
ENDVLFNTSD IGWIVGHSYI TYSPLIMGRT VVIYESAPDY PYPDKWAEII ERYRATTFGT
SATALRYFMK YGDEYVKNHD LSSIRIIVTN GEVLNYSPWK WGLEVLGGGK VFMSHQWWQT
ETGAPNLGYL PGIIYMPMKS GPASGFPLPG NFVEVLDENG NPSAPRVRGY LVMRPPFPPN
MMMGMWNDNG ERLKKTYFSK FGSLYYPGDF AMVDEDGYIW VLGRADETLK IAAHRIGAGE
VESAITSHPS VAEAAVIGVP DSVKGEEVHA FVVLKQGYAP SSELAKDIQS HVRKVMGPIV
SPQIHFVDKL PKTRSGKVMR RVIKAVMMGS SAGDLTTIED EASMDEIKKA VEELKKELKT
S
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