| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1455 |
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| Symbol | |
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| ID | 5104825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1422222 |
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| End bp | 1424129 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640507343 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001191536 |
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| Protein GI | 146304220 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGAG AAAAGTCTCA AAAAGCAGGG GATTTTGGGT TAGAATCCGA TAAGCAACTA
AGAAGATCTC TAGGAAAGTT CGAGTTGCTA TATCTTTCAC TGGGAGGAAT CATAGGATCA
GGATGGTTAT TCGGAGCCCT ATATACCGCG GAAGATGCTG GTGGATCTGC TATATTGTCT
TGGATAATCG CAGGAGTACT CGTTCTTTTC GTCGGTCTAG CTTACTCTGA ATTAGGTTCT
GCCATACCAA AGTCCGGCGG TATAGTGAGG TATCCGCATT ATTCTCATGG AGGTGTAGCT
GGATATATTA TCACGTGGAC CTATTTTCTT TCCGCGGCAT CGGTTCCTGC CATAGAGGCC
ACAGCCACAG TAACCTATCT ATCTAGCTTG GTTCCAGCAC TTACAGTAAA CGGAGTGCTA
ACTCCACTGG GCATACTGAC AGCATATCTA TTCCTTCTAT TCTTCTTCTT CCTTAATTAC
ATCGGTGTAA ATATACTAGG AAAAGTTACA CACGGTGCAG GTTGGTGGAA GTTACTGATT
CCCTCAATAA CCGTAGTAAT TCTTCTTATA TTTTATTTCC ATCCAGCTAA CTTCACTCTT
GGCGGAGGAT TTTTCCCTTC TGCTTCTAAT GTTGCTGCTG GTTCATCAGG GATCTATGGA
TTTTCTGCAG TACTTTACGC AATTCCGACT ACCGGTGTAA TATTTTCCTA CCTAGGTTTT
AGACAGGCAG TAGAATATGG TGGTGAAGGT AGAAATCCAA AGAAAGATAT TCCCTTTGCG
GTCATGGGCT CCCTAGTAAT TGCGCTTATT CTATACACAC TTTTACAGGT AGCATTTATA
GGAGCAATAA ACTGGAACGC GCTCACTGTT ACAAGGGGAA ATACAACAGT ACCTGTTACG
CCAGGCAACT GGACAGAGTT AGGTCAAACT GCCATTTCAT CGGGACCATT CTATCAGATT
TTCAAACTAG CGGCTCCTCT AGGTCTATTA TCATTAATTT TCAGTGGATG GGCATACATA
CTGCTTCTAG ATGCTGTGAT TTCTCCGAGC GGGACAGGGT GGATCTATAC TGGTACCAGT
ACTAGGACAA TGTATGGCTT CGCTACAAAC GGCTACTTGC CTGGTATCTT TCTAAAGGTG
GGTAAAACTA GGATTCCAAT TTACTCTTTG ATAGCCGCGA CTATCATTGC CGCAATATTC
ATGTTACCCT TCCCATCTTG GCAATCGCTG GTTGGTTTCA TAAGTTCGGC CACAGTCTTT
ACCTACATAA TGGGAGGGAT AGGGCTTGAG ACTCTCAGGA AGACCGCCCC AGAACTCAAT
AGGCCGTACA AGTTGCCCTT AGCAAGGGTT ATAGCGCCAA TTGCTACACT TGCGGCGGGC
CTGATAGTGT ATTGGTCAGG TTTTGCCACC CTGTTCTACG TTATCACTGG GATATTCTTG
GGATTTGCCT TATTTTTTGG CTACTATGCC TTCAAGGTTA TGGGAATTAA TAAGGCGTTT
TCCGCTATCG TAGGATTGGT AAACATAGTG GTGACCCTAG TGTTAGCCTT TGAATTCTAC
GGTGCCACCT CCGGTCTAAC TGCAGCGAAC AATGTGGCGT TCTTGATCTA TATCCTAGTC
ATGGCAGGCC TAGTAGCGTT TGATGTGGGA GTGCTTCATG CATTTGGCAA GGGTGAAGAT
GTGAAAAGGG AGATAACTGC TAGCTACTGG TTGCTAGCCT ACATTTTCGT AGTAGCCATC
ATTTCATACT TTGGAGGTTT CGGACTAAAT CCGGTGATTC CATTCCCCGA GGACACCATT
GTGGCTGCAG TGGTTACTCT AGCAGCCCAC TATGGGGCAG TGAAAAGCGG ATTTAGAACT
CAGGCCATAC AAGATATCCT AGAGGAAACA AGGGAGACCC CACCCTAA
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| Protein sequence | MSGEKSQKAG DFGLESDKQL RRSLGKFELL YLSLGGIIGS GWLFGALYTA EDAGGSAILS
WIIAGVLVLF VGLAYSELGS AIPKSGGIVR YPHYSHGGVA GYIITWTYFL SAASVPAIEA
TATVTYLSSL VPALTVNGVL TPLGILTAYL FLLFFFFLNY IGVNILGKVT HGAGWWKLLI
PSITVVILLI FYFHPANFTL GGGFFPSASN VAAGSSGIYG FSAVLYAIPT TGVIFSYLGF
RQAVEYGGEG RNPKKDIPFA VMGSLVIALI LYTLLQVAFI GAINWNALTV TRGNTTVPVT
PGNWTELGQT AISSGPFYQI FKLAAPLGLL SLIFSGWAYI LLLDAVISPS GTGWIYTGTS
TRTMYGFATN GYLPGIFLKV GKTRIPIYSL IAATIIAAIF MLPFPSWQSL VGFISSATVF
TYIMGGIGLE TLRKTAPELN RPYKLPLARV IAPIATLAAG LIVYWSGFAT LFYVITGIFL
GFALFFGYYA FKVMGINKAF SAIVGLVNIV VTLVLAFEFY GATSGLTAAN NVAFLIYILV
MAGLVAFDVG VLHAFGKGED VKREITASYW LLAYIFVVAI ISYFGGFGLN PVIPFPEDTI
VAAVVTLAAH YGAVKSGFRT QAIQDILEET RETPP
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