| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1304 |
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| Symbol | |
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| ID | 5104555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1283398 |
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| End bp | 1284021 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507193 |
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| Product | LmbE family protein |
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| Protein accession | YP_001191386 |
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| Protein GI | 146304070 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.528408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGTCC TGGTTATAGC TCCTCACCCC GACGACGAAA CCTTGTGTTG TGGAGGTTCC
ATTATACGTC ATGTGACAAG GGGAGATGAA GTTCACGTCA TTGTGGTCAC GGATGGGAGA
TACGGAGCCC CTAAAGAAGA GCTGAGGGGG AGCAAGGAGC TCGTCGAGAT GAGAATGCGT
GAGTTGCATA GGGCAGTGAG GAGGCTAGGA CTTACACCCA ATGACGTAAC CTTCCTGGGC
TTTGAGGACG CGCATGTGAA ATATAGGGTT AAGGAAGTGA CGGATGCCCT TAGGGACGTG
GTGAGGGACT TGAACGCCTC GTTACTGTAT TCTCCACTTC CCTACGATGG TCACCCTGAC
CATTCAACCG TGGGGAAAAT TGTAACGGGA ATTAACGTCA TGACAAGGTT CTATCTCATC
TGGATTCCCA TAGGGACAAG AAAAGTAGGA TTGCTCCCAC TGAGAAGGTG GAAGAGGGTG
AAGGTTAACA TTGAGGAATA TAGGGAGAAA AAGGTCGAGG CCTTGAACGA GTACAGGTCT
CAACTTGGGG GACTTACGAG GATCCTGGAA AGGTTGACTG GCAAATATGA GACTTTCTAC
CTCAGAGACA CTTCCACTCC TTGA
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| Protein sequence | MKVLVIAPHP DDETLCCGGS IIRHVTRGDE VHVIVVTDGR YGAPKEELRG SKELVEMRMR
ELHRAVRRLG LTPNDVTFLG FEDAHVKYRV KEVTDALRDV VRDLNASLLY SPLPYDGHPD
HSTVGKIVTG INVMTRFYLI WIPIGTRKVG LLPLRRWKRV KVNIEEYREK KVEALNEYRS
QLGGLTRILE RLTGKYETFY LRDTSTP
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