| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1288 |
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| Symbol | |
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| ID | 5104700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1264149 |
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| End bp | 1264973 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507178 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001191371 |
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| Protein GI | 146304055 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGGTTAA CCCCTTTTTT ACTGGTCCTG CCTGCGGTGG GGTATATTGT TGCTTTCTCT
TTTTTTCCCA CTATTGACGC CGTTTATCTA AGTTTTCAGG ATCCTCACGG GGGATTATCG
CTTCATAATT ACCAGGAGCT GGCCTACTTT AATGTAGGGG GAGCAGTCTT AGACACAGTT
CTCGTCACTG TGGGTGCGCT TCTAATTCAG CTGGCCTTGG GTTTTCTAGT GGCATCGGTA
TTAAGCAGGG AATTCCTAGG AAAGAGGGCA CTTTCCACAA TAACTATCAT TCCCATGGGC
GTGGCTACAG TGGTCGCTGC CATAACCTTT AGCTTCATTT TCCAGACCAG TGGCGGTTAC
GCCAACACAG TGTTGCATTC CTTATTCGGG ATCAATGTTA ACTGGTATCA AACTTCCCTA
TCATCCCTCC TTGTAGTCAT GCTAGCTGAT AGCTGGAAGA ACACTCCTAT AGTATCCCTG
ATTCTCTTGG CAGGAATGTC CTCGATCCCA AGGGAGTTAT ATTACTCCGC AGCCATAGAC
GGAGCCGGTT CGGTGAGGAG GTTCATTCAC ATTACACTAC CAAATCTAAG GAGCTTCATA
GGTGTAGCCC TCATCCTCAG AGGGGTTCAG GAGTTCAATA TCTTCGCTCT TCCCTTAATC
TTGATAGGAG ACCATCCTCC CCTACTTACC ACCTTGGTGT ATAACCTCTA CACGACCACC
TTTCCTGAAG TGGGCCTAGC CCTTGCTGCT GCAACCGTTC TCCTAGGTTT TATCCTGGTC
TTCATGGGTG TTGTGATAAA ATTGACAGGA GGTAGATCCT CATGA
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| Protein sequence | MRLTPFLLVL PAVGYIVAFS FFPTIDAVYL SFQDPHGGLS LHNYQELAYF NVGGAVLDTV
LVTVGALLIQ LALGFLVASV LSREFLGKRA LSTITIIPMG VATVVAAITF SFIFQTSGGY
ANTVLHSLFG INVNWYQTSL SSLLVVMLAD SWKNTPIVSL ILLAGMSSIP RELYYSAAID
GAGSVRRFIH ITLPNLRSFI GVALILRGVQ EFNIFALPLI LIGDHPPLLT TLVYNLYTTT
FPEVGLALAA ATVLLGFILV FMGVVIKLTG GRSS
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