| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1287 |
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| Symbol | |
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| ID | 5104699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1263352 |
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| End bp | 1264152 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507177 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001191370 |
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| Protein GI | 146304054 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGGT CCTACATAGG TGCAATTGTG GTGGGCGCAT ATTTCCTGTT TCCACTCTAT
GTCCTTTTCC TGTTGGCCTT CAATTCGCCA ACCATCACTA TACTGGCAAG GTATCCTGCT
CTCCTACCTA TCTCATTAAC GTTGAATAAC CTGGTTGTGT CCCTGCAAGG TTCAGCGTTC
ATAGACCCCT TGGTAAAGAG CCTAGAAACT GCCACCCTGG TTGGGGTGAT TACCCTAGTA
CTCGCAGTTC CAGCAGGTTA CGGTCTCAGC AGGCTTCCTA GAGCTATTGC CTACCCCTTC
TTAGTTCTCC TTCTTGTGAC AAATATGATG CCAGCTATCG TTATTGGGAT TCCCATAGCA
GTGGAGTTCA TTAAGCTCCA TCTCTTTGAG AGCGTTGAGG GGCTTGCCCT AGCGCAGACT
CTGATTACCC TTCCACTGGC AACTTTCATT CTTCAAGGGA CTTTCTCCTC AATACCGTCA
GACCTAGAGA ATCAAGCCAG GGTCGATGGT GCGGGCCTAC TGAGAAGGTT ATTCTCGATC
CTGTTGCCCA TAGCCGCTCC TGGAATAGCA GCTGCCTTCC TAATATCCTG GATGTTCTCC
TGGGACGAGT TCACATATGC CATACTATTG ATTCCGTATC ATTCTACGCT TCCAGTCACC
ATATACTCTG ATGTAACTAG GGGTAACCTG CTCGCAGGAG TTGCGTTTTC CCTGGTCTTC
ACGATTCCCG TAATAGTATT AACTTTCGCG TTACAAAAGT ATCTAAGAGG AGAATATTTG
GCAGGGGGGA TAAAGGCATG A
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| Protein sequence | MKWSYIGAIV VGAYFLFPLY VLFLLAFNSP TITILARYPA LLPISLTLNN LVVSLQGSAF
IDPLVKSLET ATLVGVITLV LAVPAGYGLS RLPRAIAYPF LVLLLVTNMM PAIVIGIPIA
VEFIKLHLFE SVEGLALAQT LITLPLATFI LQGTFSSIPS DLENQARVDG AGLLRRLFSI
LLPIAAPGIA AAFLISWMFS WDEFTYAILL IPYHSTLPVT IYSDVTRGNL LAGVAFSLVF
TIPVIVLTFA LQKYLRGEYL AGGIKA
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