| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0869 |
|---|
| Symbol | |
|---|
| ID | 5105228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 801491 |
|---|
| End bp | 802408 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640506773 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001190966 |
|---|
| Protein GI | 146303650 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.348691 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATAGATG TGTCCCACCT ATCGAAGACC TTCCAAGTGA AGGGGAAAGA GATCCACGCG
TTGAGCGATA TAACGTTCGA GGTGAAGACA GGTGAGATAT GTGGCCTTGT GGGACATAAC
GGAGCTGGAA AGACTACCCT TGTAAAGATC CTTTCAACCC TAATAATTCC AGACAGTGGA
GAGGCCAGGG TCGAGGGTCA TGACGTGGTT AGCGAGGCCA ATATTGTCAG AAAGTTGCTG
GGCGTTATGA CTGTCAGCGA GAGGGCCTTC TACTACAGGC TCACGGGAAT GGAGAACCTC
ATGTTCTTTG CGTCAATCCG AGGTCTTTCC CTAGGGGAGT CAAGGTCAAG GGCGAAGGAA
CTCTTGGAAA TGGTAGGACT CCTAGATTGG AAGGACATCC CTTACATGAA GTATAGCACA
GGGATGGCCA GAAAACTCGC TCTAGCCAGG GCATTGATCA CCGACCCTCC CGTGATCCTC
ATGGACGAGC CAACCCTGGG AATGGACCCA ATCTCCTCGA GGGAATTTCG TAGGCTAGTT
GAGGGGTTGG CCAAGAGAAA GACCGTATTA ATGACGTCAC ATAACATGGC CGAAGTGGAG
GACCTGGCCC AGAGGGTAGT AATCCTGAAC AGGGGTAGTG TAGTTGCCAG CGGTTCTCCC
CAGGAACTAA AGGAGAGGGT GGGAACCATG AAGTTGGTTA GAACAAGGTC ACCCGATGCG
AGGCTAAGAA AATTCGTTGT GGGACTATCA GATCAGTACT TCTTGGTACG GGTCCCGGAG
CACTTCAACG TTGAGGGAGA TGAGGTTAGA AGGGAACCCG CCACGTTGGA GGACGTTTTC
GTGTCTCTTA CGGATGAAGC AGATTCCACG ACCAACAGAT CTAGGGGAGG TGGAGGTTGG
AGAAGATGGG CATCCTAA
|
|---|
| Protein sequence | MIDVSHLSKT FQVKGKEIHA LSDITFEVKT GEICGLVGHN GAGKTTLVKI LSTLIIPDSG
EARVEGHDVV SEANIVRKLL GVMTVSERAF YYRLTGMENL MFFASIRGLS LGESRSRAKE
LLEMVGLLDW KDIPYMKYST GMARKLALAR ALITDPPVIL MDEPTLGMDP ISSREFRRLV
EGLAKRKTVL MTSHNMAEVE DLAQRVVILN RGSVVASGSP QELKERVGTM KLVRTRSPDA
RLRKFVVGLS DQYFLVRVPE HFNVEGDEVR REPATLEDVF VSLTDEADST TNRSRGGGGW
RRWAS
|
|---|
| |