Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0838 |
Symbol | |
ID | 5104264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 767591 |
End bp | 768430 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640506742 |
Product | signal transduction protein |
Protein accession | YP_001190936 |
Protein GI | 146303620 |
COG category | [K] Transcription [R] General function prediction only |
COG ID | [COG0517] FOG: CBS domain [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.545659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGTTA AAACGCTCAT GAACCCAAAT CCCCCCATAA TCTCAGTTAG TGACGGACTC AAGGAGGCCT TTAAGAAGGT TAACGACAGG GGGCTAGGCA GGGTCATAGT GGCAGACGAG GTTGTGAAGG GTATCCTTTC CACAAGGGAC CTCCTCTCAA TTCTCCTCAG CTTCTGTCCC TCAGCTTGCA CGCAGGCTGA CCTTTACAAG ATGGGAGTTA CCCCAGCCTC AGGCTACATG ACCGTGAATC CTATGACCGT TGCAGAGGAC CAGGACGCCC TTGAGGCAAT CACAATCATG GTGACCAGGA ACTTTGGGTC TCTCCCTGTG GTCAATGCCT CACGTAGGCC TGTGGGGATG GTCACGGAGA GGGACTTTCT CCTCATGTTT CAGGACCTTG ACCCCATGTT TTCCGTGTCG GGTTTCGTCA CCCCTAGAGT GAATACTGTG TTTCGAGACA CCCTACTGGA ACAGGCAGTT AGGATGATGC TGAGGAGGGG GTTCAGGAGA CTTCCAGTGA CTGACGAGGA TGGAAAAGTA GTTGGCATGG TAACTGCAGC TGACGCGGTG AAGGCAGCAG CGAAGGCCGT CGAGAAACTT GAACCGGAGC TCTTCTTCGG GAGGAGGATA AGGGATATCA TGAAAACTCC AGTGGTAACG GTGGAAGAGG ACAGGTCAGT CAACGAGGCA GCTGCGCTCA TGATCACGAA GGGGATCGGG GCCCTGGTTC TCCTGGACAA GGAGGGAAGG GCTAAGGGGA TTGTGACCGA GAGGGACCTG CTCATCGCCC TTCACTACCA ACTCCATCTT CCCTTCGTCA AGGGTAAGAG TCACGCATGA
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Protein sequence | MIVKTLMNPN PPIISVSDGL KEAFKKVNDR GLGRVIVADE VVKGILSTRD LLSILLSFCP SACTQADLYK MGVTPASGYM TVNPMTVAED QDALEAITIM VTRNFGSLPV VNASRRPVGM VTERDFLLMF QDLDPMFSVS GFVTPRVNTV FRDTLLEQAV RMMLRRGFRR LPVTDEDGKV VGMVTAADAV KAAAKAVEKL EPELFFGRRI RDIMKTPVVT VEEDRSVNEA AALMITKGIG ALVLLDKEGR AKGIVTERDL LIALHYQLHL PFVKGKSHA
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