| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0379 |
|---|
| Symbol | |
|---|
| ID | 5103622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 327857 |
|---|
| End bp | 328834 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640506285 |
|---|
| Product | SirA family protein |
|---|
| Protein accession | YP_001190480 |
|---|
| Protein GI | 146303164 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0425] Predicted redox protein, regulator of disulfide bond formation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAACTT CAGTTGTGTT GAGGGTGAGG GGGTTCCAGC AACTCCTAGA TGTGGAGAAG
TATCATAGGC TCTACATGCT ATCCGACGTT AGGAGATTGA GTTGGGGTTA CTCTGCCAAG
TTAAAGTTGG GCAAGATCTC ATTCCCCGTT TTGGTGAAGG TTGGGAGAAA CTCTCTGGAA
ATGTACGAGG AGCAGGGTAA ATTCATGGTT CACTTGGAAT TCGTTGAGGG AGACAGCGTC
AAGGTAAGGA TCAGGGTGGA GGCGTCGAAT GAAATGGTGA AGTCTTCCCT AGAGGAGGGA
ATTTCCAGGA ACCTTAATGA ATACGCCGAA TCCATCTGTA AGGCTGGGAA GGGAAGATCT
CAGGAGCCCT TGGGATTAAT CATGATGATG AAACCCTTTG TCAGGAGGCA TCTTGACGTT
AGGGGGGAGC AATGTCCTAT TCCAGAAATT GCAGCAAAGA AGGAGTTAAC CAAGATGAAA
CCAGGGGAGG AATTGGAGAT ATTAGTGGAT CATCCTGCTG CCGTAGACGT GACGCTTCCT
GAGGTTGCGA AACTCATGAA CTGCAGGTAT GACATCTACA ACATGGGAGA TTACGTTTCC
TTTGTGATGC TGAAACTGGG AGATCCAATC ATGAATAAAA ATTACCTTGA GGCGTTGACA
AAACGCGAGA GGATACCTGA GATGATGAAG GACATGGGAT TCATAGCGTT TCTGTACTCT
GTCTTTGACA AGGTGATAAG GCAATTACCC ACAGATGGTC TTTACCCAGA GATCTTCAGA
TATGACGGCC TCACCCTCGT AACCTCTGCG TCCATAGGTC GCGGTTGGCT AGCGGTAGCA
TTAGTTGAAG ACGACAAGAT TTTGGGAATG ATGCTGGACA TTAAGGGAGA TAGGTACTGG
AATCAGGACG CGCTGAAGGT CATAAACAGG GTGAAGGGAA TAGGGAACGT CTTTTACCTC
AAGGCTAGTT CAACCTAA
|
|---|
| Protein sequence | METSVVLRVR GFQQLLDVEK YHRLYMLSDV RRLSWGYSAK LKLGKISFPV LVKVGRNSLE
MYEEQGKFMV HLEFVEGDSV KVRIRVEASN EMVKSSLEEG ISRNLNEYAE SICKAGKGRS
QEPLGLIMMM KPFVRRHLDV RGEQCPIPEI AAKKELTKMK PGEELEILVD HPAAVDVTLP
EVAKLMNCRY DIYNMGDYVS FVMLKLGDPI MNKNYLEALT KRERIPEMMK DMGFIAFLYS
VFDKVIRQLP TDGLYPEIFR YDGLTLVTSA SIGRGWLAVA LVEDDKILGM MLDIKGDRYW
NQDALKVINR VKGIGNVFYL KASST
|
|---|
| |