Gene Msed_0355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0355 
Symbol 
ID5105513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp307889 
End bp308641 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content44% 
IMG OID640506261 
ProductATPase-like protein 
Protein accessionYP_001190456 
Protein GI146303140 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATAA CCCAGTCTTA TTACATGGAT TTAGGAACAC TGACCCTAGA GAAGGATCAA 
GTAATTAGAA AGTGTATAGC TATCCTAGGA ATAAGAGGAT CAGGAAAATC AAATACTGCG
AAAGTGTTCG CTGAGGAACT CATCAAGGAG AAAGTTCCCC TAGTTATAGT GGATCCAGAC
GGTGAATATA GGGGGCTTGA GGCTATAATT TTTGATAAAT TTAACGTTGA TCCAGAGGAA
GTGGTTAACC TTCTTATGGT TGGTAAAAGC GTGGTCCTTG ATGTTAATGA CTGGAACGAG
GAAGTATTCA AGTTCCTGAC CACCTTCTTC AACATCCTTT GGGAGACTTC CAAGATTTAT
AGGAGGGACA TCTTCGTCCT CCTAGAGGAG GCACATGAGT TTATCCCCCA GGGAACAAGA
ACCCCGCTTA GCGACGTCTT GGTGAGGATT GCCCTTCGAG GGAGAAAGAG GGGGATTGGG
ATGATCCTGG TGAGTCAGAG ATCAGCCAAG GTAAACAAGG ATGTCCTTAC CCAGAGCGAG
ATCTATTTCC TCCACAAGGT GGTTCACCCA GTCGACGTAA GGGTTTACAA GGAAATACTA
CCTCTAAAAT CCAGGGAAAT TGAGGCTGAG ATAAAGGCCA TGGAAACTGG AGATGCGATA
TTTTACAAGG ATGGGGAACT AAGAAAGGTT AGAATTAGAA AGTTTGATGA GTTTCCGTCG
GTCATCCAGA GCGGTGAAAA GGCGGAAATA TAA
 
Protein sequence
MSITQSYYMD LGTLTLEKDQ VIRKCIAILG IRGSGKSNTA KVFAEELIKE KVPLVIVDPD 
GEYRGLEAII FDKFNVDPEE VVNLLMVGKS VVLDVNDWNE EVFKFLTTFF NILWETSKIY
RRDIFVLLEE AHEFIPQGTR TPLSDVLVRI ALRGRKRGIG MILVSQRSAK VNKDVLTQSE
IYFLHKVVHP VDVRVYKEIL PLKSREIEAE IKAMETGDAI FYKDGELRKV RIRKFDEFPS
VIQSGEKAEI