| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0254 |
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| Symbol | |
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| ID | 5103874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 213880 |
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| End bp | 215199 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506160 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001190355 |
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| Protein GI | 146303039 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.180707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCTT TAGATAAAGT AGATAAGGCT GTATGGACCT CAACCCATAG TCTACTCTTT
GCTTCTCTGG CCTTAGGCTT CTTCATGTGG GGAACAATTA GTACCATAGC TCCCCTTCTA
TACCCCTCTA TAAACAACGT GTTCTTTATC ATAGCACCCA TAGTCGCAAC CCTAGCTGGG
AACTTGATCT TCCCTTTCAT CTCTGACAAG ATGTACGGAA GGAAAAGGAC CTTTATTGTT
ACAATGTCTA TGTACGGTAG TGGAGCGCTC ATTATAGCTA TTGTGTCCCT GGTTTCACAA
TTCACTAAGA TTCCTCTCAC TAGTCCCGCT CTACTTTACA CCCTAACCTT TGGAATAGTC
CTAGGAGTAC TTGGGGTGGA AGGGGAAGTT CCAGTTATGT TGTCGTATGC GGCTGAGATG
ATGCCCATCG TGAGGAGGGA CCAGGTTCTA GTTCTTGCCC CAAACTTTGA CAATATAGGG
GCCATGGTAG CCTCAGCAAT TGTTCTTGTA TCGGCCTCGT CAAGTGCTCC AACTCTAGAG
TTGCTCTCCC TGTCCCTCAC CGCACTAGTA GGTTTAGGTT TTCTCATAGC GGTGAGACTT
AGATTACCCG AGTCCGTTAG ATGGCTATAC GTGAAGGGGT TTAGGGAGAG AGTAGAGGCC
GAACTTTCCA AGTTGGGGAA CAGGATACAA GAGGTCAAAG AGAACCGGAA CGTAAGCAAG
TTGAGCCTGC TCTCTAGATA CTGGTTCTTG GTTGCGATTG CCATATCGCA ATACCTGACC
TACGGCCTCA TGGCCTTCTA CATAGGAGAT TTCTATTTCC CGAGTCTGGA GAATTTCATT
GTGTTTATTG CTAACGTAGG AGCTAGCGTA GCTGGGGTAA TTGCGGGCTT CGCAGTTAAC
AGGGTAAAGA GCAGGAAATT CTCACTTTTC TCGTTCCTGG GAGGGACAGT CACGATCCTG
GGAATACTTC TCACAATCAA CTCTGTCTCC AGTAACATGG GCCTATTTTA CGGCCTCCTT
CTCCTTAACA TGGCCTTTAG TGAGTTCGGC TGGGCTGTGA GAACCATTTA CGAACCCCTA
ATCCTTCCAA GCAGTAATAG GGCCTTCATG ATAGGGCTCG TTAGAGTCTT TCCCATCACT
CTGAGCTCCC TCTCTGTGTA CTTTACGAGT TTTATTAACT CCCCGTTCCT TTACGTGCTA
TATAATACCG CCCTATGGGC CCTAGGAGCC ATTGCGACCA TTACCTGGTA CTTCAAGGGC
TACGACGTAA ACATGACTCC CATAGAAGTA TCGTCCCAAA GCGTTGTGAA AGAGGGTTAA
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| Protein sequence | MEPLDKVDKA VWTSTHSLLF ASLALGFFMW GTISTIAPLL YPSINNVFFI IAPIVATLAG
NLIFPFISDK MYGRKRTFIV TMSMYGSGAL IIAIVSLVSQ FTKIPLTSPA LLYTLTFGIV
LGVLGVEGEV PVMLSYAAEM MPIVRRDQVL VLAPNFDNIG AMVASAIVLV SASSSAPTLE
LLSLSLTALV GLGFLIAVRL RLPESVRWLY VKGFRERVEA ELSKLGNRIQ EVKENRNVSK
LSLLSRYWFL VAIAISQYLT YGLMAFYIGD FYFPSLENFI VFIANVGASV AGVIAGFAVN
RVKSRKFSLF SFLGGTVTIL GILLTINSVS SNMGLFYGLL LLNMAFSEFG WAVRTIYEPL
ILPSSNRAFM IGLVRVFPIT LSSLSVYFTS FINSPFLYVL YNTALWALGA IATITWYFKG
YDVNMTPIEV SSQSVVKEG
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