| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0151 |
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| Symbol | dcd |
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| ID | 5105004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 123118 |
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| End bp | 123636 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640506054 |
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| Product | deoxycytidine triphosphate deaminase |
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| Protein accession | YP_001190252 |
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| Protein GI | 146302936 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00954201 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTCTAG GGGATAGGGA TCTCAAATAC TACTTGGAAA AGAAGTGGAT ACTTGTGGAC
CCATTAACGG AAGATAGCGT TAGGGAGAAC GGTATAGACA TGAGAGTTGG TGGTGAGATT
GCTAGGTTTA AGAATGTGGA TAGGCCTTTC GAAGAAGGAA TGAACCCTGA CGACTTCTTC
GTTAGGGAAA GGGGGAATGA GTTCGTGATT TGGCCCAATG AACATGTGTT AATGGTAACG
GAGGAATATC TTAGACTCCC GCAGGATATA ATGGCTTTCG TCAACATGAG GTCCAGTTTT
GCCAGGTTAG GCCTTCTAGT TCCCCCTACG ATCGTGGATG CCGGATTTGA GGGCCAACTC
ACGATAGAGG TCATGGGGTC AGGATTTCCT GTCAAAATTA GAAGGGGTAC CAGATTCCTT
CATCTGATCT TCGCGAAGAC TCTTACGCCC GTAGAGAACC CATATAAGGG AAAATATCAA
GGACAAAGGG GAGTTACTAT ACCAAAGTTC ACGAAGTGA
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| Protein sequence | MILGDRDLKY YLEKKWILVD PLTEDSVREN GIDMRVGGEI ARFKNVDRPF EEGMNPDDFF
VRERGNEFVI WPNEHVLMVT EEYLRLPQDI MAFVNMRSSF ARLGLLVPPT IVDAGFEGQL
TIEVMGSGFP VKIRRGTRFL HLIFAKTLTP VENPYKGKYQ GQRGVTIPKF TK
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