| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0083 |
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| Symbol | |
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| ID | 5104661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 72547 |
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| End bp | 73239 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640505982 |
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| Product | ERCC4 domain-containing protein |
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| Protein accession | YP_001190184 |
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| Protein GI | 146302868 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1948] ERCC4-type nuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.131653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000430873 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTGAGAA TTTACGCCGA TACTAGGGAG AAGCAATCTG GAATTCCTGA CCTTTTACGC
GATCTGGGTG CTTTAGTCTT CTTACAGCAG TTATCTGTTG GGGACTATAT AGTAGCTGAC
GGGGTTGCAG TGGAAAGGAA AAATGTTTTT GACTTGATGA ATTCTGTTTT TGACAAGAGA
TTTTTCGACC AACTGGAAAG GCTCAGGGAA GTCTACTCAA AGGTATTCAT TCTTGTGGAG
GGGAATTTGG AGGGAGCCAA GACAATTACA ACTAAGTGGA AGATTTTCAA CTCTGCCCTC
ATTACTGCCA CTGTGGATTA TGATGTTGGC GTCCTTTATT CTCTAGATAA GAGGGAATCT
GCAGAAGTGT TGGTTACCCT GGCAAGAAGG TACCAGGAGA GGGGTGTAGA GAGAAAGCCT
ATTTCCCTTC ATGACAAACC TAAGTTTGAA AGTTTAGATG AGATGCAGCT CTACCTCGTT
CAATCTCTGC CCAACGTGGG AGGAAAGATA GCCCTAAGGT TGTTAACAGA ATTTTCCACA
GTAAGAAATA TATGTAATTC TAGTATAGCA GACCTTGAGA GAGTAATGAA GAGCAGGAAA
AAAGCGGAAC TTCTGTATAA GATATTCAAT ACGAAGTTCT CTAGTAATTC AGATAAGAAG
TCTGCGTCGC TGACAGATTT TGTAGAGGAA TAA
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| Protein sequence | MLRIYADTRE KQSGIPDLLR DLGALVFLQQ LSVGDYIVAD GVAVERKNVF DLMNSVFDKR
FFDQLERLRE VYSKVFILVE GNLEGAKTIT TKWKIFNSAL ITATVDYDVG VLYSLDKRES
AEVLVTLARR YQERGVERKP ISLHDKPKFE SLDEMQLYLV QSLPNVGGKI ALRLLTEFST
VRNICNSSIA DLERVMKSRK KAELLYKIFN TKFSSNSDKK SASLTDFVEE
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