Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1906 |
Symbol | |
ID | 8880014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 1965044 |
End bp | 1966603 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | 2-isopropylmalate synthase |
Protein accession | YP_003507683 |
Protein GI | 291296285 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.115585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000778681 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGGCACA TCCGAATTTT CGATACCACC CTGCGGGACG GCGAGCAGAG CCCTGGTGTA GCCCTTTCCC TCCAGCAGAA GCTGGAAATC GCCCATGGGC TGGCCCGGCT CAACGTGGAC ATCATCGAGG CGGGCTTCCC GGTGAATGGG GCCAGCGAGT TCGAGTGTGT CTCGCGCATC GCCGCCGAGG TCAAGGGGCC GGTGATCTGC GCCCTGGCCC GCACCCACAA GCTCGACATC GAGCGGGCTG CGGCGGCCCT CGAGAAGGCC GAGAAAAAGC GCATCCACGT GTTTACCAGC GCCTCCAAGG TGCACCTGCA GTACATGCTG CGCAAGACCC CGGAGGAGAT ATTGGAAATT TCCGACGCCA TGGTGCGCTA CGCCCGGCAG TTCACCGACG ACGTGGAGTT TAGCGCCCAG GACGTAATGC GGGCCGACTT CGACTTCGTC ATGAAGCTCT ACGAGACCGC CATCAACGCC GGGGCCACCA CCATCAACAT CCCCGACACC ACCGGCTACG GCACCCCGCA GGAGTACGGG GCCCTCATCA AGCGCATCTA CGACGAGGTG GTGCGGGGAC GGGATGTGCA CATCTCGGCC CACTGCCACG ACGACCTGGG CATGGCCACC GCCAACAGCC TGGCCGCGGT GGAGAACGGG GCCACCCAGA TCGAGTGCAC CATCAACGGC ATCGGGGAGC GGGCGGGCAA CACCGCGCTG GAAGAGGTGG TAATGGCTTT GTACGTGCGC CGCGACCACT ACAAGGCCCA TACCCAGATC AACACCCGCG AGCTGTACCG CATGAGCCGG ATGGTGGAGC GCTACACCGG CATGGTGGTG CAGCCCAACA AGGCCATCGT GGGGGACAAC GCCTTCGCCC ACGAGTCGGG CATCCACCAG GACGGGGTCA TCAAGAACAA AGAGACCTAC GAGATTATGA ACGCCGAGCT GGTGGGCCGC CAGGCCGCGG TGCTGGTGCT GGGCAAGCAC TCCGGGCGGG CCGCGGTCAA GAAAGCCCTG GCCGACCTGG GTTACAAGCT GGACGACACC CAGATTGGCG CGATTTTTGC CCGCTTCCGG GAGATTGTGG AGCGCAAAGG CCCCATCGAG ACTGAGGAAC TGCGGGCCCT GGTGGAGAGC GAGTCGGTCT CGACCCCGCA CCTGTTCAAC CTCGAGAAGC TCCAGTTCTT CTCCGGCTAC GGCATGCTGC CCACCGCTAC GATAAGCCTC GAGACCCCCA AAGGCGTGGT CACCACCACC GCGATTGGGG ACGGGCCGGT GGACGCGGTG TATAAGGCCC TGTCCGAGGC CATCGGGTTC AAGCCCGAGC TCGAGCTGTA CCGGGTGGAG TCGGTAACCG GGAGCACCGA GGCTTTGGGT GAGGTCACGG TCAAGCTCAA GTTGGGCGAG GTGATGGCCA CCGGGCACGG CATCTCCCCG GACATCATCG AGGCTTCAGC GCGGGCCTAC CTGGATGCCG CCAACAAGCT GGCCGCGGGG CAGTCGGCGC GGCATCCGAA GTCGCTCGAG GAAGTGCAGC GCTCGGGTTT GGGCAAATAA
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Protein sequence | MRHIRIFDTT LRDGEQSPGV ALSLQQKLEI AHGLARLNVD IIEAGFPVNG ASEFECVSRI AAEVKGPVIC ALARTHKLDI ERAAAALEKA EKKRIHVFTS ASKVHLQYML RKTPEEILEI SDAMVRYARQ FTDDVEFSAQ DVMRADFDFV MKLYETAINA GATTINIPDT TGYGTPQEYG ALIKRIYDEV VRGRDVHISA HCHDDLGMAT ANSLAAVENG ATQIECTING IGERAGNTAL EEVVMALYVR RDHYKAHTQI NTRELYRMSR MVERYTGMVV QPNKAIVGDN AFAHESGIHQ DGVIKNKETY EIMNAELVGR QAAVLVLGKH SGRAAVKKAL ADLGYKLDDT QIGAIFARFR EIVERKGPIE TEELRALVES ESVSTPHLFN LEKLQFFSGY GMLPTATISL ETPKGVVTTT AIGDGPVDAV YKALSEAIGF KPELELYRVE SVTGSTEALG EVTVKLKLGE VMATGHGISP DIIEASARAY LDAANKLAAG QSARHPKSLE EVQRSGLGK
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