Gene Mrub_1675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1675 
Symbol 
ID8879781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1711022 
End bp1712185 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content64% 
IMG OID 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_003507456 
Protein GI291296058 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0898959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TTTGGATGGT TCTTCTGGCA GTTTTGGGTC TGGCCGGGTT GGCCCTGGCC 
CAGACCACGG TGCGGGTGGG TGTGCTCCTG CCCATCTCGA CCGTAGCGGG CAAGGCCGCT
CTGAACGGAG TACAGCTCGG CGTGGATCAG GTCAACGCCG GCGGCAAGGT AAAGATTGAG
CTGGTGGTGG TGGACGACGG CAACGCCCCG GCCACCGCGG TGCCGGCCCT CACCAAGCTG
ATGACCGTGG ATCGGGTGGA CATTGTGATC GGCGGGCTGG CCTCGGGGGT TACCTTTGCC
CTCTCAGGGC CCGTCAAGCA GTACCAGCCG CTCTTCCTCT GCATCGGAGC GGCCAGCAGC
GTGGTGGAGC AGGCTTTTAG CGATTACAAC CGCTTCTTCC ACTACCACCC CTGGGACTAT
CACAACGTGG CGGCGGCCCT CGAGTTCTTC AAGTACCTCT ACGACAACGG GGCCCGGCGC
GTGGCCATCC TCTGCGAAGA TGGGCCTTTT GGCTCGGCGG GCATCCAGAC CTACCGCCAG
CAGCTCGAGC GCCAGGGTTA CACCGTGCAG GCCGAGCCTT TCAAGTCGGG TTCGGGTAGC
TTCACCGCCA TTCTGACCCG CCTCAAGGGC TTCCGGCCCG ATATTCTGTA CTGGATCGGC
TACGACGTGG ACGCCCTGCC CATCGCGGCG CAAACCCGGC AGGTGGGGCT CGAGCCCAAA
CTCATCTACG GGGCCCCCCC AGCCTGGCCG ACCGGCTTCG AGAAAAACAA CCTTTCCAAC
GACATAGCTG GCATGACCGC CTGGCTGCCC TCGGTAGCCA ACAACGAAAG CCGCCGCTTC
GTGAACCTTT ACCGGCGCAA GTTCGGCGAG GTCACCGACG AGTACATGGC CCCCATGGGC
TATGTGATTG CCCTGAGCCT GGGCAGGGCG CTCGAGGCCG CCGGTTCTAC CGATAAAGAT
CGGATTGCCG CCGAGCTGGC CAAGGTTCAG ATGGATACCC CCTTCGGCCC CCTATCCTTC
AAGCCCTCCG ATACCGGGCG TACCCGCTTC CAGGGCTTCA ACCAGAGCAT CTGGCTACAG
TTCCAGTACC TGGAGGGCTC GAGGCGCCCG GTCTTCCCGC CCAACCGCGC AGCCCGGCCC
CTGCGCTTCC CAGGCAACTA CTAA
 
Protein sequence
MKKVWMVLLA VLGLAGLALA QTTVRVGVLL PISTVAGKAA LNGVQLGVDQ VNAGGKVKIE 
LVVVDDGNAP ATAVPALTKL MTVDRVDIVI GGLASGVTFA LSGPVKQYQP LFLCIGAASS
VVEQAFSDYN RFFHYHPWDY HNVAAALEFF KYLYDNGARR VAILCEDGPF GSAGIQTYRQ
QLERQGYTVQ AEPFKSGSGS FTAILTRLKG FRPDILYWIG YDVDALPIAA QTRQVGLEPK
LIYGAPPAWP TGFEKNNLSN DIAGMTAWLP SVANNESRRF VNLYRRKFGE VTDEYMAPMG
YVIALSLGRA LEAAGSTDKD RIAAELAKVQ MDTPFGPLSF KPSDTGRTRF QGFNQSIWLQ
FQYLEGSRRP VFPPNRAARP LRFPGNY