Gene Mrub_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1006 
Symbol 
ID8879095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp999613 
End bp1000917 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content63% 
IMG OID 
Productsignal recognition particle protein 
Protein accessionYP_003506791 
Protein GI291295393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.236237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAA GCCTCTCCCA ACGCATCCGA GCCGCAGTTG ACAAGCTGCG TGGGCGGGGG 
CGTATCACTG AAGCCGACCT CAAGGCCACC CTGCGCGAGA TCCGCATGTC GCTGCTGGAG
GCCGATGTCA ACTTCGAGGT GGCTAAAAAC TTCGTAAACA AGGTGCAGGA GAAGACCCTG
GGCCAGGCTG TGCTGGAGAG CCTGACCCCG GCGGAACAGA TCCTGAGCGT GGTTTACGAA
GAGCTGGTCG AGATGCTGGG TGGGGAGGCC AAACAGCCCC TGCTCAAGAA CGAGGGCAAC
CTGTGGTTCA TGGTGGGCTT GCAGGGCTCG GGAAAGACCA CCACCTCGGG TAAGCTGGCC
CACTTCTACA AGTCCAAAGG GCGGCGTCCG CTGCTGGTCG CGGCCGATAC CCAGCGGCCC
GCGGCCCGCG AGCAGCTCCG CATCCTGGGC GAAAAGATCG GGGTGCCGGT GCTGGAAGTG
GCCGACGGTG AGCGCCCCGA GACCACCCGC GCGCGCTTGC AGCAGCACCT GACCTTCGAC
TACCGCGACC TGGTAATCGT CGATACGGCG GGCCGCCTCC AGATTGACCA GGCCCTGATG
GACGAGCTGG CCCAGCTCAA GCAGGTGATG GGCCCCTCCG AGACCCTGCT GGTGGTGGAC
AGCATGACCG GCCAGGAGGC TCTGAACGTC TCCAAAGCCT TTGACGAGCG CATCGGGGTA
ACCGGCCTGA TTCTAACCAA ACTGGATGGC GATGCCCGGG GCGGCGCGGC GCTTTCGGCC
CGGTATGTGA CCGGCAAACC CATCTACTTT GCGGGGGTTT CGGAAAAGGT CGAAGGCCTG
GAGCCCTTCT ACCCCGACCG GCTGGCCCAG CGCATCCTGG GCATGGGCGA CCTGCAGACC
CTTCTGGAAA AAGCCAGACA GGCCGAGCTC GAGGCCCCGC AAAAAGACCT CAAGGAGATC
ACCCTCGAGG ACCTCATCAC CCAGATGCGC CAGATGCGCA AGATGGGCAG CTTCACCGAG
ATCCTGGGCA TGATACCGGG TATATCCAGA ATGCTACCCC CCGGCTTCTC GGTGGACGAA
AAGCAGGTTA ATCGCATGGA GGCCATCGTG CTCTCCATGA CCCCTAAAGA ACGCCGCGAC
CCCCGCATTC TGAATGCCTC GCGCCGCAAG CGCATTGCGG CGGGTTCTGG CACGACGGTG
CAGGAGGTTA ACCGCCTCAT CAAAACCTTC GAGGACACCA AGCAGATGCT GAAAACCCTG
GCCAAGCAGC AGGCTCGAGG GGGGCGGGGT TTGTTCAGGA GATAG
 
Protein sequence
MFESLSQRIR AAVDKLRGRG RITEADLKAT LREIRMSLLE ADVNFEVAKN FVNKVQEKTL 
GQAVLESLTP AEQILSVVYE ELVEMLGGEA KQPLLKNEGN LWFMVGLQGS GKTTTSGKLA
HFYKSKGRRP LLVAADTQRP AAREQLRILG EKIGVPVLEV ADGERPETTR ARLQQHLTFD
YRDLVIVDTA GRLQIDQALM DELAQLKQVM GPSETLLVVD SMTGQEALNV SKAFDERIGV
TGLILTKLDG DARGGAALSA RYVTGKPIYF AGVSEKVEGL EPFYPDRLAQ RILGMGDLQT
LLEKARQAEL EAPQKDLKEI TLEDLITQMR QMRKMGSFTE ILGMIPGISR MLPPGFSVDE
KQVNRMEAIV LSMTPKERRD PRILNASRRK RIAAGSGTTV QEVNRLIKTF EDTKQMLKTL
AKQQARGGRG LFRR