Gene Mrub_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1000 
Symbol 
ID8879088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp991526 
End bp992698 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content68% 
IMG OID 
Productputative beta-lactamase 
Protein accessionYP_003506785 
Protein GI291295387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.358949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGG TTCGCTTTAT GGCCCTGCTG CTGTTTGGTT TGCTACTCGC GGTAGCGCAG 
GCCCCCCTCA GCCCCAAAGC GGCTCTCGAG CGCCTCTTCA CCGAGCGCCC GGCCAGGGCC
GAGTGGTTTG CCCCGGCCTT CTTGCAGCAG GTGCCGCTGG CCCAGGTGGA AGCCATTCTC
CAGCAACTGC TGGGCGGGCT GGGGCGCTAC GAGGGCGTGG AGCCGGACGG CCCCAACTTT
CGGGTGAACT TCGAGCGCGG CGTGGTGCCC GCACAGATCG CGCTGGACAG CGAGGGGCGC
ATCCAGGGGC TGTTCTTTAG GCCGCCCCAG CCCAAGGCCG CCCTGACCCC CGAGCAGCTC
CTGGCCGAGT ACCGCAAGCT ACCGGGAGAG GTCAGCGTGC TGGTGCTGGA AGGCCCCCAG
GAGCGCCTGA GCCTGAACGC CGACCGCGCG CTGGCGGTGG GCTCGAGCTT CAAACTAGCC
GTGCTGGAAG CCCTGCGCCA GCAGATCGAA GCCGGGCAGC GCCGCTGGAG CGATACCGTG
CCGCTGCGCC CGGAGTGGAA AAGCCTGCCC AGCGGCACCC TGCAAAACCT GCCCGACGGA
ACCCCCCTGA GCCTCGAGCA GTACGCCACC CAGATGATCT CCATCTCCGA CAACACCGCC
ACCGACGCAC TAATAAGCAT TGTCGGGCGG GCCGAGGTGG AAAAGCTCGC CCCCCGCAAC
CGGCCCTTCC TGACGACCCG CGAGGCTTTT GTGCTCAAGA ACCCGCAAAA CCGGGAGTGG
CTCGAGCGCT ACCGGGCCAA CCCCGCGGAG CGGGCCGCCC TGCTCCCCCA ACTGGCCCGC
CTGCCCCTGC CCGACGTGAG CGTGTTTGCC GGGGGGCCGG TGGCCCTTGA CGTGGAGTGG
TTTTTCAGCA CCCGCGAGCT GTGCGCGCTG ATGGGCCGGG TACAGGCCCT ACCCCTGATG
TCGCTCAACC CCGGCCTTGC CAACCCCGCC GACTGGCAGC GCGTGGCCTA CAAAGGGGGC
TCCGAGCCGG GCGTCCTGAA CCTGACCACC TGGCTTACCG CCAAGGATGG CAGGCAGTAC
TGCGTCTCGG CCACCTGGAA CAACCCCCAG GCCCGGCTCG ACGAAAACCA GTTCTTCTTG
CTCTACACCA GCCTGCTAAA CAGCTTGAAG TAG
 
Protein sequence
MKPVRFMALL LFGLLLAVAQ APLSPKAALE RLFTERPARA EWFAPAFLQQ VPLAQVEAIL 
QQLLGGLGRY EGVEPDGPNF RVNFERGVVP AQIALDSEGR IQGLFFRPPQ PKAALTPEQL
LAEYRKLPGE VSVLVLEGPQ ERLSLNADRA LAVGSSFKLA VLEALRQQIE AGQRRWSDTV
PLRPEWKSLP SGTLQNLPDG TPLSLEQYAT QMISISDNTA TDALISIVGR AEVEKLAPRN
RPFLTTREAF VLKNPQNREW LERYRANPAE RAALLPQLAR LPLPDVSVFA GGPVALDVEW
FFSTRELCAL MGRVQALPLM SLNPGLANPA DWQRVAYKGG SEPGVLNLTT WLTAKDGRQY
CVSATWNNPQ ARLDENQFFL LYTSLLNSLK