| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3411 |
|---|
| Symbol | |
|---|
| ID | 6139459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 3622307 |
|---|
| End bp | 3623371 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641629119 |
|---|
| Product | putative hemagglutinin-related protein |
|---|
| Protein accession | YP_001756072 |
|---|
| Protein GI | 170749812 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2706] 3-carboxymuconate cyclase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00108111 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCGCA TGACCGATAC CGCCCCCCGC GGCCTCGCCT TCGTGGGCTG CTTCACGACC
GAGCGGCGCC GGGCGCGCGG CCAGGGCATC GACATCTACC GGACCGGCCG CGACCTCGGC
GACTGGACGC GTCTCGGGCG GGTCGAGAAC CTGACGAACC CGTCCTTCCT GGCGACCGAC
CCGGCGCGCG CGATCCTCTA CACGGTCCAG GGCGACGGCG AGGCGGCGAG CGCCTTCGCG
GTCTCGCCCG ACGGCACCCT GCGCGGTCTC GGCAGCGCCG CCACCGGCGG CACCAACAGC
GTGCACCAGG CCCTCGCCCC CGACGGCCGC TTCCTGATCG TCGCCAACTA CGCCAGCGGA
TCGGTCGCCC TCATGCCGGT GCGCGCCGAT GGCGGCCTGG AGCCCGCGCG CGACGTCCTG
CCGCTGCCGG GCGAGCCGGG CCCGCATCGG ACCGAGCAGG CCTGCGCCCA CCCGCACCAC
GTGGTCCTGT CGCCGGACGG CCGCCACGTC GTCGTCCCCG ACAAGGGCCT CGACCGCGTC
TTCGTGCTGA AGCTCGCGGG TGAGCGGCTC GCCGTCGTCT CGCAGACCGC GATGCGGCCC
GGCGCCGGCC CGCGCCACAT CGCGTTCCAC CCGCACCGGC CCCTCGCCTT TCTGGTCAAC
GAGCTGGACT CGAGTGTCGC CACCTGCCGG TGGGACGCGG ACGCCGGGAC GCTGACGCCC
CTGCACCTCG CCTCGACCCT GCCGCCGGAC TTCTTCGGGG CGAGCACCGC CGCGGCCATC
GCGGTCACGC CGGACGGGCG GTTCGTCTAC GCGTCGAACC GCGGGCAGGA CGGGATCGCG
CGGTTCCGGG CGGACCCGGC CGGGCGCCTC GAGCCGGCGG GCTGGACGCC CTCCGGCGGC
CGCGACCCGC GCTTCATGAT CCTGGCACCG GACGGAGGCC ACCTGCTCGT CGCCAACGAG
CAGGGCGACA GCCTCGTCGC CTTCGCCATC GATCCCGAGA CCGGGGACCT GACTCGGACG
GGCGAACGCC CGAGCCTCAG CCCCTGCACG ATCGCGTTCT TGTAG
|
|---|
| Protein sequence | MLRMTDTAPR GLAFVGCFTT ERRRARGQGI DIYRTGRDLG DWTRLGRVEN LTNPSFLATD
PARAILYTVQ GDGEAASAFA VSPDGTLRGL GSAATGGTNS VHQALAPDGR FLIVANYASG
SVALMPVRAD GGLEPARDVL PLPGEPGPHR TEQACAHPHH VVLSPDGRHV VVPDKGLDRV
FVLKLAGERL AVVSQTAMRP GAGPRHIAFH PHRPLAFLVN ELDSSVATCR WDADAGTLTP
LHLASTLPPD FFGASTAAAI AVTPDGRFVY ASNRGQDGIA RFRADPAGRL EPAGWTPSGG
RDPRFMILAP DGGHLLVANE QGDSLVAFAI DPETGDLTRT GERPSLSPCT IAFL
|
|---|
| |