| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3900 |
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| Symbol | |
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| ID | 6312281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 4152838 |
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| End bp | 4156377 |
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| Gene Length | 3540 bp |
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| Protein Length | 1179 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642652602 |
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| Product | urea carboxylase |
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| Protein accession | YP_001926562 |
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| Protein GI | 188583117 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG2049] Allophanate hydrolase subunit 1
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.201135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAGA AGGTTCTGGT CGCCAATCGC GGTGAGATCG CCGCCCGCGT CGTGCGCACG
CTCAAGCGCA TGGGAATACC CTCGGTCGCC GTCTATTCGG ATGCCGACCG CTTCACGCCG
GGCGTGCTCG CCGCCGACGA GGCGGTGCGC CTCGGGCCCG CACCGGCCGC GCAGAGCTAT
CTCGACGTCG AGGCGGTGAT CGCCGCCTGC CGGGCGACGG GGGCGCAGGC CGTTCATCCC
GGCTACGGCT TCCTGTCGGA GAATGTCGGC TTCGCCGAGC GGCTGGCGGC CGAGGGCATC
CGCTTCATCG GCCCGCGTCC GGAGCATCTG CGCGCCTTCG GCCTCAAGCA CACCGCTCGC
GAACTCGCGA AAGTCAGCGG CGTGCCGCTT CTGCCCGGCA CCGACCTGCT GCCCGATGTC
GAGACCGCGC TGAGGGCGGC CGAGGCCATC GGCTATCCCG TGATGCTCAA GAGCACGGCG
GGCGGCGGCG GCATCGGGAT GCAGCTCTGC CATTCGGCGG AAGAGCTGGC CGAGCGCTTC
GCCGCGGTCG AGCGCACGGC CCGCGCCAGC TTCGGCGATG CCCGCGTCTA TCTCGAACGC
TTCGTGGCGC AGGCGCGCCA TGTCGAGGTG CAGATCTTCG GCGACGGGCG GGGCCGCGTC
GTGGCTTTGG GCGAGCGCGA CTGCTCGCTC CAGCGCCGGA ACCAGAAGGT GATCGAGGAG
ACGCCGGCCC CCGGCCTCTC CGAGCCGGTG CGCGCCCGCC TCCACGCGGC AGCAGTGGCG
TTGGGCGAGA GCGTCGCCTA CGCGTCGGCC GGCACGGTCG AGTTCATCTA CGATCCGCAG
CGCGAGGATT TCTCGTTCCT CGAAGTGAAC ACGCGGCTCC AGGTCGAGCA TCCGGTGACG
GAGGCCGTGT TCGGCATCGA TCTCGTCGAG TGGATGGTGC GGCAAGCCGC GGGCGAGGAC
CCGATCGGTG AGGCCGGCCC GCTCGTGCCG CGGGGCGCGG CGATCGAGGC GCGGCTCTAC
GCCGAGATCC CGCACGCCAA CTTCGCCCCG AGCGCCGGTC TGCTCACCGA GGTGCGCTTT
TCGGAGTCCG CCCGCATCGA CGGCTGGATC GCGGCCGGCA CCGAGGTCAC CCCGTTCTAC
GATCCGATGC TCGCCAAGAT CATCGTCACC GGCGCCGACC GGCCGGCGGC GATCGCGGCG
CTTCAGGCGG CGCTCGCCGG CACCGCCGTC TCCGGCATCG AGACGAATCT CGACTATCTG
CGCACCATCG CCGCCTCCGA TCTCTTCGCC AGCGGCCGGG TCGCGACGAC GGCCTTGCGC
GACCTCGAAT ACCACCCGCG CAGCATCGAG GTTCTGCTGC CCGGCCCGCA ATCGAGCCTG
CAGGAACTGC CCGGCCGCCT CGGCCTGTGG GAGGTCGGCG TGCCGCCGAG CGGCCCGATG
GATGCGCGTT CCTTCCGCGC CGCCAACGCG CTCGTGGGCA ACGGGCCGGA CACCTGCGCC
CTCGAACTCA CCGTCTCCGG CCCGACGCTG CGCTTCCACG CGGACGCTCG GATCGCGCTG
GCCGGCGCCG CGATGCGGCT CACCCTCGAT GGCGAGGCGC GCCCGCACGG GGAGGCTTTT
TCGGTGAAGG CGGGCCAGAC GCTCACTGTG GGCGCGATCG GGGGCCCGGG CCAGCGCGCC
TATCTGGCCC TGCGCGGCGG TTTCGCGGCG CCCGTGGTGC TCGGCTCGCG GGCGACCTTC
GCGCTCGGCG CCTTCGGCGG CCACGCCACG GGCGTGCTGA AGGCCGGCGA CGTGCTCCAT
CTCGGCGACG CGCCCGCGGT CGCGGCCGCC TCGCCCGAGC CCGCACCGCT GACCCAGGAC
TGGGCGATCG GCGTCGTCTA CGGCCCGCAC GGCGCGCCCG ACTTCTTCCA GGAGGCCGAC
ATCGCCGACC TGTTCGCGGC GTCCTACGAG GTGCACTTCA ACTCGGCCCG CACCGGCGTG
CGCCTGATCG GCCCGACCCC GCGCTGGGCC CGCACCGACG GCGGCGAGGC GGGCTTGCAT
CCCTCCAATC TGCACGACAA CGCCTACGCC GTCGGCGCCA TCGACTTCAC CGGCGACATG
CCGATCCTGC TCGGCCCGGA CGGCCCGAGT CTCGGCGGCT TCGTCTGCCC GGCGGTGATC
GCCCGCGATG AACTCTGGAA GATGGGCCAG CTCCGGCCCG GCGACCGCGT GCGGTTCCAT
CCCGTGGCCC GCCCGGAGGA CGCGGCCCTC GCGCCGGCCG CCCCCGCCGT GATCGGCGGC
GCAGGGATGG CCGCCGGCTC CCCGATCCTC GCCCGCGACG AGACCGGCCC GGTCCCCGTC
GCCTATCGCC GCCAGGGCGA CGACAACCTC CTCGTCGAGT ACGGCCCGAT GGCCCTCGAT
ATCGGGTTGC GGCTGCGGGT CCATCTGCTC GCCGAGGCGG TGCGAAGCGC CCGCCTGCCG
GGGCTGATCG ACCTGACGCC GGGCATCCGC TCGCTGCAGA TCCATTACGA CGGCGCGTCG
CTGCCGCGCC CCCGCCTCCT CGGGCTCTTG CGCGAGATCG AGGCCGGTCT GCCGGCCGCC
GAGGATGTCA GCGTCCCGAG CCGCACCGTC CACCTGCCGC TGTCGTGGAA CGACCCGCAG
GCGGAGCTCG CGATGCGCAA GTATCAGGAG CTGGTGCGGC CCAACGCGCC GTGGTGCCCC
TCGAACATCG AGTTCATCCG CCGCATCAAC GGCCTGCCCG ACGAGGCGGC GGTGCGCGAC
ATCATCTTCG ACGCCGAATA CCTCGTGATG GGATTGGGCG ACGTCTATCT CGGCGCGCCG
GTGGCCACCC CGGTCGATCC GCGCCACCGC CTCGTGACGA CCAAGTACAA CCCCGCCCGC
ACTTGGACGC CGGAGAACGC GGTCGGCATC GGCGGCGCCT ATATGTGCAT CTACGGCATG
GAGGGGCCGG GCGGCTACCA GCTCTTCGGG CGCACGATCC AGATCTGGAA CACGTGGCGC
ACGACCCGCG AATTCGTGCC CGGCCATCCG TGGCTGCTAC GGCCCTTCGA TCGCATCCGC
TTCGTCCCCG TTTCGCACGA CGAACTCACC GAGGCGCGTG CCGCCTTCCC CCACGGGGCC
TATCCGGTGC GGATCGAGGA GGGCACCTTC TCCTACGCCG CGCACCGGGC GAGGCTCGCG
GACAACGCCG CTGAGATCGA CGCGGCCCGT GCCCGCCAGC AGGCGGCCTT CACCGCCGAG
CGCGAGCGCT GGAAGGCGGA GGGGCTCGAC AGCTTCGTCG CCGACGAGGC TCTGGCCGAG
GAAGCCGCCG CGATCCCGCC GGGCTGCGAG GGCGTGCCGA CGACGGTGCC GGGCAATGTC
TGGAAAGTCC TCGTCGGCGC GGGCGAGGTT GTGGCTGCCG GCCAGACGGT GGCGATCCTC
GAATCGATGA AGATGGAGGT GGCCGTCACC GCCCCCGTCG GCGGGAGGGT CCGCGAGATC
CGGGCCCAGC CCGGCCGCAC CCTGCGGGGC GGCGACCTCG TCGCCATCCT CGAAATCTGA
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| Protein sequence | MFEKVLVANR GEIAARVVRT LKRMGIPSVA VYSDADRFTP GVLAADEAVR LGPAPAAQSY
LDVEAVIAAC RATGAQAVHP GYGFLSENVG FAERLAAEGI RFIGPRPEHL RAFGLKHTAR
ELAKVSGVPL LPGTDLLPDV ETALRAAEAI GYPVMLKSTA GGGGIGMQLC HSAEELAERF
AAVERTARAS FGDARVYLER FVAQARHVEV QIFGDGRGRV VALGERDCSL QRRNQKVIEE
TPAPGLSEPV RARLHAAAVA LGESVAYASA GTVEFIYDPQ REDFSFLEVN TRLQVEHPVT
EAVFGIDLVE WMVRQAAGED PIGEAGPLVP RGAAIEARLY AEIPHANFAP SAGLLTEVRF
SESARIDGWI AAGTEVTPFY DPMLAKIIVT GADRPAAIAA LQAALAGTAV SGIETNLDYL
RTIAASDLFA SGRVATTALR DLEYHPRSIE VLLPGPQSSL QELPGRLGLW EVGVPPSGPM
DARSFRAANA LVGNGPDTCA LELTVSGPTL RFHADARIAL AGAAMRLTLD GEARPHGEAF
SVKAGQTLTV GAIGGPGQRA YLALRGGFAA PVVLGSRATF ALGAFGGHAT GVLKAGDVLH
LGDAPAVAAA SPEPAPLTQD WAIGVVYGPH GAPDFFQEAD IADLFAASYE VHFNSARTGV
RLIGPTPRWA RTDGGEAGLH PSNLHDNAYA VGAIDFTGDM PILLGPDGPS LGGFVCPAVI
ARDELWKMGQ LRPGDRVRFH PVARPEDAAL APAAPAVIGG AGMAAGSPIL ARDETGPVPV
AYRRQGDDNL LVEYGPMALD IGLRLRVHLL AEAVRSARLP GLIDLTPGIR SLQIHYDGAS
LPRPRLLGLL REIEAGLPAA EDVSVPSRTV HLPLSWNDPQ AELAMRKYQE LVRPNAPWCP
SNIEFIRRIN GLPDEAAVRD IIFDAEYLVM GLGDVYLGAP VATPVDPRHR LVTTKYNPAR
TWTPENAVGI GGAYMCIYGM EGPGGYQLFG RTIQIWNTWR TTREFVPGHP WLLRPFDRIR
FVPVSHDELT EARAAFPHGA YPVRIEEGTF SYAAHRARLA DNAAEIDAAR ARQQAAFTAE
RERWKAEGLD SFVADEALAE EAAAIPPGCE GVPTTVPGNV WKVLVGAGEV VAAGQTVAIL
ESMKMEVAVT APVGGRVREI RAQPGRTLRG GDLVAILEI
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