Gene Mpop_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3872 
Symbol 
ID6312340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4117634 
End bp4119037 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content68% 
IMG OID642652574 
Productputative monooxygenase 
Protein accessionYP_001926534 
Protein GI188583089 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0559897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCC AAATCCGCTT CAACGCCTTC GACATGAACT GCGTCGGGCA CCAGTCGCCG 
GGCCTGTGGG CCCATCCGCG CGACCGCTCG TGGCAGTACA AGGATCTCGA ATACTGGCAG
GATCTCGCCC GCACGCTCGA ACGCGGGATC TTCGACGGGA TCTTCATCGC CGACGTCGTC
GGCTACTACG ACGTCTACAA GGGCTCCAAC TGGCACGCCC TGCATCAGGC GGCGCAGATC
CCGGTCAACG ACCCGCTCCA GCTCGCCGCC CCGATCGCGC TGGCCACCGA GCATCTCGGC
ATCGGCATCA CCGCCTCGAC CTCGTTCGAG CACCCCTACA CCTTCGCCCG CCGCCTCTCG
ACCGCCGACC ACCACACCAA GGGCCGCGTC GGCTGGAACA TCGTCACCTC GTATCTGGAG
AGCGGGGCGA AGAATGTCGG CCAGTCGGGG CTCGGACGCC ACGACAACCG CTACGAGGTC
GCAACCGAGT ACGTCGAGGT GCTCTACAAG CTGTTCGAGG GCAGCTGGGA ACCTGGCGCG
GTCCTGCGCG ACCGCGAGCG GCGGATCTTC ACCGACCCGT CGAAGGTCCA TGAGATCGAC
CATCGCGGCC GGCACTTCAC CGTGCCGGGC TACCATCTCT GCGAGCCCTC GCCCCAGCGC
ACGCCGGTGC TCTATCAGGC CGGCGCCTCC GGGCCCGGCA AGGCCTTCGC GGCGGGACAC
GCCGAGTGCG TCTTCGTCGG CGCGCCGCTG AAATCCATGC TCAAGGCCTA TGTCGCCGAC
GTGCGGGCCA AGGCCGTCGC CGCCGGCCGC TCGGCCCGCG ACGTGCTGAT CTACAACCTC
ACCACGGTCA TCGTCGCCGA GACCGACGCG GCGGCGCAGA AGAAGTTCGA GGAATACCAG
TCCTACACCT CCTACGACGG CGCGCTGGTG TTCATGTCGG GTTGGAGCGG GATCGATTTC
GGCCAGTACG CGCCGACCGA TCTGGTGAAG AAGGTCGAGA CCAACGCCAT CGTCTCGATG
GTCGAGAGCT TCTCCTCGGC CGAGAAGCCG TGGTCGATCG CGGAACTCGC CCGCTGGGGC
GGCATCGGCG GGATCGGCCC GGTCTTCGTC GGCTCGGCGT CCACCGTCGC CGACATCCTC
CAGGAATGGG TCGAGGAGAC CGACGTCGAC GGCTTCAACC TCGCCTACGC GGTGACGCCG
GAGACCTTCG AGGACACGGT CAACCTGCTG GTGCCCGAAC TCCAGCGCCG CGGCGTCTAC
CCCAAGAGCT ACCGCCCCGG GACGCTGCGC GAAAAGCTGT TCGGGAGGGG ACCGCTCCTG
CCGGAGACCC ACCCGGCCCA CGGCTACCGC GACATCGCGG CGGTCAAGGC GCGCGAGGCC
TCGCGCCTCG AGGCGGCGGA GTGA
 
Protein sequence
MTRQIRFNAF DMNCVGHQSP GLWAHPRDRS WQYKDLEYWQ DLARTLERGI FDGIFIADVV 
GYYDVYKGSN WHALHQAAQI PVNDPLQLAA PIALATEHLG IGITASTSFE HPYTFARRLS
TADHHTKGRV GWNIVTSYLE SGAKNVGQSG LGRHDNRYEV ATEYVEVLYK LFEGSWEPGA
VLRDRERRIF TDPSKVHEID HRGRHFTVPG YHLCEPSPQR TPVLYQAGAS GPGKAFAAGH
AECVFVGAPL KSMLKAYVAD VRAKAVAAGR SARDVLIYNL TTVIVAETDA AAQKKFEEYQ
SYTSYDGALV FMSGWSGIDF GQYAPTDLVK KVETNAIVSM VESFSSAEKP WSIAELARWG
GIGGIGPVFV GSASTVADIL QEWVEETDVD GFNLAYAVTP ETFEDTVNLL VPELQRRGVY
PKSYRPGTLR EKLFGRGPLL PETHPAHGYR DIAAVKAREA SRLEAAE