Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3766 |
Symbol | |
ID | 6312169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 4011805 |
End bp | 4012767 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642652478 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001926439 |
Protein GI | 188582994 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.763855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTTC GTCAGCTTCG GTACTTCACG CAAATCGCGG AGAGCGGGAA CGTCTCGCGA GCCGCTGAGG TGCTGCGGAT CGCCCAGCCC TCGCTCAGCC AACAGATGCG CAACCTTGAG GACGAGCTCG GTGTCGAACT GCTGTTCCGG CACGCCCGCG GGGTCACGCC CACGGAGCTC GGGCTGAAGT TCTACGAACA CGCGCGGCGT ATTCTGCAGG AGGTCGAGCG GGCCAAGGAT GTCATGCGCT CACAGGCAAC GAGCCCGAGC GGACGGATCT CGGTCGGATT ACCGACTTCA GCCTGCCGTG GACTTTCTCT GCCACTCCAC CGCGCTATGG CGGAGGCGCT TCCCAACATC AGTCTCCATA TCGTCGAGGC GATGAGCGGT ACGTTGGACG AGTGGATCCA ATCCGGACGT CTGGACGTCG CACTGCTCTA CGACCACAAA GCGTTCGAGC ACGTGGCTTG GACCGAGATG ATGGTCGAAG ACTTGATGTT CATCGTCCCC ACCTCGCATC CGCTGGCCGC GCGACGCGAG ATCGAGTTCG GACAGGTCTT TCAGCAGGCA CTTCCAGTGG TGCTTCCTGG CCGCCCGAAT GTGCTGCGCG GCGTGATCGA GCAACTCGCG GCACGTCACG ACATCACTCT GGCTGCAACG GATTGCGAGA GCCTGCCGGC GATCGCAGAG CTCGTGCGCG CTCAGGCCTT CGCGGCCATC ATGCCGCATT TCGCTTTGGC TGCGGAGATC AAGCGCAGCG AGATGGTAGC TATACCAATT GTCGATCCGA CACCTTCCTG GCGACTTTCT GTTGTGGTGT CGCAGCGAAC TCTGAATACG CGTGGCAGCG AGGCCGTTGC CGAAGTTCTG GCAGGCGTCA TCGGAGATCT TGTCCAGCGC TCCGTCTGGC GCGCTCGTCT CAAGCCCACG GAGCGCCCCG CCCCTGCGCG CGCTCGTGCC TAA
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Protein sequence | MDLRQLRYFT QIAESGNVSR AAEVLRIAQP SLSQQMRNLE DELGVELLFR HARGVTPTEL GLKFYEHARR ILQEVERAKD VMRSQATSPS GRISVGLPTS ACRGLSLPLH RAMAEALPNI SLHIVEAMSG TLDEWIQSGR LDVALLYDHK AFEHVAWTEM MVEDLMFIVP TSHPLAARRE IEFGQVFQQA LPVVLPGRPN VLRGVIEQLA ARHDITLAAT DCESLPAIAE LVRAQAFAAI MPHFALAAEI KRSEMVAIPI VDPTPSWRLS VVVSQRTLNT RGSEAVAEVL AGVIGDLVQR SVWRARLKPT ERPAPARARA
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