Gene Mpop_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1620 
Symbol 
ID6312420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1747996 
End bp1749180 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content76% 
IMG OID642650344 
ProductTonB family protein 
Protein accessionYP_001924319 
Protein GI188580874 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.381372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCGT CCATGCCGCC GACGCCGGCT TCGATGCCTG CCCCCCAGCC TGCCCCCCAA 
CCTGCCCCCT TGCCCGCTTC CTTGCGCGGG CAGGCCGGGT CGGGGCTGCC CTCGGGCGCG
TCCGAGGGCG GCGGCCAGGG GCGCCTCGCG GCGGCCTTCG TCCTGGCGCT CGCCCTGCAC
GCCGCCGGGC TGCTCGGCAT CACCTATCTG CATCTGACGC CGCCCGCTCC CCCGGGCGAC
CAGGAGATCA CGATCGATCT CGCCCCGCAG ATGATGGAGG CCGAGACCCA GGCCCCCGCC
GAGACGCAGC GCTCCGAGGC GATCCCCGAG GAGGCCAAGC CCGAGGGCGA GCCGGAGACG
GCCCAGCCGG TCGAGACGCC GCAGGAGGTC CAGCCTCCGC CCCCGCCCGA GATGACGCAG
GTGGCGCCCG AGGAGGTGCA GCCGCCCCCG CCCACCGAGA TGACCGAGGT CACCCCGGAG
GAGGTGCAGC CGCCGCCTCC GCCGCCGGAG GCCGTCACCG AGGTCCCGCC CGACACGCCG
CCCCCGCCGC CGGAGGAGCA GATCATCACC TCGCAGGCGC AGGAGGCGGA GCCGCTGGCG
CCGCCCCCGC CGGTGGTGGC AAAGGCGCCC GAGCCGCCCA AGCCCGATCC CAAGATCGAG
GAGCGCCGCA AGGCCGCGCT GGAGAAGAAG CGCGAGGCCG AGCGCGAGGC GCGCCGCAAG
GAGATCCTTG AGAAGAAGCG CGAGGAGGCG CAGAAGGAGG CGCGGATCAA GGCGGCCAAG
GCCAAGGCGG AGCGTGACGC CGCCCGGCGC GCCCAGGCCG CGCAGGCCGG CAATTCGCAG
CGCAGCTCCG CCGCCACCTC GCGCCAGAGC GCCACGGGAT CGGCCGCATC GGCCAGCGAC
CCCAACGCCA TGGCCGCCTG GAAGGGCTCC ATCGCCTCGA CGATCCGCGG CCGCATGAAC
CGCGAGGCCG CCGCTGGCAC CAGCGGCGGT GTGGCCACCG TGCGGTTCAC CGTGAGCCGC
TCCGGTGCGG TGAGCGGCGC GGCTCTGGTC GGCAGCAGCG GGGTCGGCGC CATCGACGGC
GCCGCGCTCG CCGCGGTGCG CGGCAGCCTG CCGCCGGCCC CGGCCGGGGT GACGCAGTCG
AGCCTCGCGG TCACCGTCCC GCTGCGCTTC AGCCCGGGAC GATGA
 
Protein sequence
MPASMPPTPA SMPAPQPAPQ PAPLPASLRG QAGSGLPSGA SEGGGQGRLA AAFVLALALH 
AAGLLGITYL HLTPPAPPGD QEITIDLAPQ MMEAETQAPA ETQRSEAIPE EAKPEGEPET
AQPVETPQEV QPPPPPEMTQ VAPEEVQPPP PTEMTEVTPE EVQPPPPPPE AVTEVPPDTP
PPPPEEQIIT SQAQEAEPLA PPPPVVAKAP EPPKPDPKIE ERRKAALEKK REAEREARRK
EILEKKREEA QKEARIKAAK AKAERDAARR AQAAQAGNSQ RSSAATSRQS ATGSAASASD
PNAMAAWKGS IASTIRGRMN REAAAGTSGG VATVRFTVSR SGAVSGAALV GSSGVGAIDG
AALAAVRGSL PPAPAGVTQS SLAVTVPLRF SPGR