| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1329 |
|---|
| Symbol | |
|---|
| ID | 6310121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1443966 |
|---|
| End bp | 1444619 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642650051 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001924034 |
|---|
| Protein GI | 188580589 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4129] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.666788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.253277 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACGG ATCGGGCGTT GTGTCACGGG GATGAGGACA TGAGAGACGA GCGGACCGTC
GCGGAGGATG CGCGGCAGGA AGCCAACGCC GAGACGACGC GCCGGGCCGA TCGCGACACC
AGCCGCATCC GCTGGCTGCG GGATCAGGTT ACGCGGCTCC ACAAGCGTCT GCCGCTGCGC
CGCCGTTTCG CCGGCGGCCT CGCGCACGGG ATCATGTCGT CGGTCGCGGC CATCGCCGCC
TATCTGCCGA CCCAGCTTCT CGGGCTGCAG GAGGGATTCT GGGCGGCGAT CACCGCGGTC
GCGGTGGCCC AAACCGAGTT CGGCGCCACC CGCTCCACCG CCCGGGACCA ATTCACCGGC
GCCGCCATCG GCGGCCTCAT CGGACTCGCG GCCTACCTCA CCCTGGGTCC GTCCGTTCCG
ACCTACGCTT TGGGCGTGGT GCTGGCGATC CTCGCCTGCT GGCTCCTCAA CGTGGCGAGC
GCCTGCCGCC TTGCCGGCAT CACCGCCACG ATCATCCTGC TCGTCCCCCA TCTCGGGCCG
GTGGAGCGCA TGGCGGGTTC GCGCGTGCTG GAGGTCGGCT GGGGCGTGAG CGTGGCCATC
GTCACGGTCT GGCTGGTGAC GCGGGTGAAC CGCTGGCTCG GGGTCAAGCT GTAG
|
|---|
| Protein sequence | MPTDRALCHG DEDMRDERTV AEDARQEANA ETTRRADRDT SRIRWLRDQV TRLHKRLPLR
RRFAGGLAHG IMSSVAAIAA YLPTQLLGLQ EGFWAAITAV AVAQTEFGAT RSTARDQFTG
AAIGGLIGLA AYLTLGPSVP TYALGVVLAI LACWLLNVAS ACRLAGITAT IILLVPHLGP
VERMAGSRVL EVGWGVSVAI VTVWLVTRVN RWLGVKL
|
|---|
| |