| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0608 |
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| Symbol | fliF |
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| ID | 6313401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 653158 |
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| End bp | 654870 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642649316 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001923321 |
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| Protein GI | 188579876 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.269822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0804297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGTC GCGAGCAAGC CGAGAGATTG TGGAGCAACA TCGTCGATCT CGGCGCGAGG
CGGCTGATCG CCCTCGGGCT GGTCGGCCTC TTGGTGTTCC TCGGGGTCGG GATCGGCGCC
TACTATCTCA GCCGCCCGGC GCAGGAGACG CTCTACACCG GCCTGTCGCG TGAGGATGTC
TCGCGCATCG GCGGCGTGCT CAAGGACAAC GGCATCCCCT TCGACGTGTC CTCCGACGGC
ACCGCGGTGC TCGTCTCCTT CGGCCACACC GCGCAGGCGC GGATGCTGCT CGCCGAGAAG
GGCCTGCCGC AGAGTTCGAA ATCCGGCTAC GAGCTGTTCA ACGATCTCGG CTCGCTCGGC
ATGACCTCCT TCATGCAGGA GGTGACCCGC GTGCGGGCGC TGGAAGGCGA GATCGCCCGC
ACCATCCAGG GCATGAAGGG CGTACGCGCC GCCCGCGTCC ACCTCGTGCT TCCCGACCGC
GGTTCGTTCC GCCGCGACCA GCAGCCGGCC TCGGCCTCCG TGGTGGTGCG CACCGAGCCC
GCCGACGACG TGTCGGGCGC GCAGGCGATC CGCCAGCTCG TCGCCTCGGC CATTCCCGGC
ATGAAGCCCG ACCGCGTCAC CGTGATCGGC TCGGAGGGCA CGGTGCTGCT CGCGGGCGAC
GATGCCGGCA CGGCGCCGAC CGGCAAGATG GCGACGCTGG AGAAGTCGGT GAGCCGCGAG
ATGCAGGACA ACATCCGCCG CACGCTCAGC CCCTATCTCG GCGTCGGCAA TTTCGAGGTC
AGCGTCGCGA CCCAGCTCAA CACCGACAAG ACCTCGACCA ACGAGACGAT CTACAACCCC
GATCAGCGGG TCGAGCGCTC GGTGCGCTCG GTGCGCGAGA GCGAGAACGC GCAGAACCGC
AACAGCCAGC GCCCGACCAG CGCCCAGGAG AACCTGCCCG ACCAGCGCAC CCGCTCGGAC
GGCAACGACC AGTCGAGCAA CGAGAGTTCG AAGAAGGAGG ATCTCACCAA CTACGAGATC
TCCCAGAAGA CCGTTCAGAC GGTGAGCGAC GGCTATGCCA TCCGCCGGCT CTCGGTCGCG
GTGCTCGTCA ACCGCTCGCG CCTGACCGCG CTCGCCGGAC CCGACGACAA GGCCGCGCTC
GACAAGCAGA TCGCCGAGAT CGAGGAGCTG GTGGGCTCGG CCGCGGGCTT CAGCAAGGAG
CGCGGCGACA CGATCAAGGT CGCGGCGGTG GGCTTCGTTA ACGACGGCCA GCCGCTGGAG
CCGGTGCCGC CGCTCTCGCT CACCGACGTG ATGATGAAGC AGTCCGGCAC GCTCATCAAC
GCGGCGACGA TCCTCGTCGT GGCGGGCCTG CTGATCTGGT TCGGCCTGCG CCCGGCCCTG
CGCGCCATCC TCGCGACGCC GGAGGCCGCC CAGAGCGAGG TCGCGGCGCT CGCCGGCCCC
GAGGGCGCGC CCGCCCTCGC CGCCGGCATG GCCTCCGGTC TGGCCGCCGA CGGCAACATG
GCGCTCGCCG CACCGGGCAC CGCGCTTCCC GGCGCCGTCG GCGCGGGCGA GGCGGCCAAG
CTCCCCGCGC CGGGCGTCGC CGGTCTGCTG GAGGAGCTGG AGGACAAGAT GGCCCGCTCG
CCGCAGAAGC GGCTGGAGCA GCTCATCGAC ATCGACGAGG AACAGGTCGC GGCCGTGCTC
AAGCGCTGGC TCATGCGTGA GGAGCCGGCG TGA
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| Protein sequence | MFGREQAERL WSNIVDLGAR RLIALGLVGL LVFLGVGIGA YYLSRPAQET LYTGLSREDV
SRIGGVLKDN GIPFDVSSDG TAVLVSFGHT AQARMLLAEK GLPQSSKSGY ELFNDLGSLG
MTSFMQEVTR VRALEGEIAR TIQGMKGVRA ARVHLVLPDR GSFRRDQQPA SASVVVRTEP
ADDVSGAQAI RQLVASAIPG MKPDRVTVIG SEGTVLLAGD DAGTAPTGKM ATLEKSVSRE
MQDNIRRTLS PYLGVGNFEV SVATQLNTDK TSTNETIYNP DQRVERSVRS VRESENAQNR
NSQRPTSAQE NLPDQRTRSD GNDQSSNESS KKEDLTNYEI SQKTVQTVSD GYAIRRLSVA
VLVNRSRLTA LAGPDDKAAL DKQIAEIEEL VGSAAGFSKE RGDTIKVAAV GFVNDGQPLE
PVPPLSLTDV MMKQSGTLIN AATILVVAGL LIWFGLRPAL RAILATPEAA QSEVAALAGP
EGAPALAAGM ASGLAADGNM ALAAPGTALP GAVGAGEAAK LPAPGVAGLL EELEDKMARS
PQKRLEQLID IDEEQVAAVL KRWLMREEPA
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