Gene Mpop_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0560 
Symbol 
ID6310082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp608587 
End bp609108 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content66% 
IMG OID642649268 
Productputative membrane protein of unknown function 
Protein accessionYP_001923273 
Protein GI188579828 
COG category[S] Function unknown 
COG ID[COG5488] Integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.261245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCG GCAACATCTC TGCGCATCCC GATGGGCTCG ACCCAGCGAC GATGGATCGG 
CCGGTCTATT CGGCCGTGAT CCGGCCACAC CAATCCCTGA GCCAGGACGG CTTCCGGATC
GTGATGGGGC TCTGCTGCCT CGTCTCGCTC GTCACATCGA TTGCCTGCTG GCGCGCCGGC
TTCTGGCCGA TCGCCGGCTT CTTCGGCCTC GACATGCTGG CGCTCTACGT TGCGCTGAAG
GTGAGTTTTC GCCGCGGACG TTCCTTCGAG GAGGTCGCGA TCTCGCCCAT CGAGGTCTTT
CTTGCCCGCA TCGATCCGCG GGGTGTGCGC CGCGAGTGGC GCTTCAATCC GCTCTGGACC
AAGCTGAGTC GGGTCGATGA CGAGGAATTC GGCTTGCGGA CGCTGACGCT GACCTCGCGC
CGCGAGCATG TCGTCGTCGC CCGGGATGCC TCTCCGGACC AGCGCGCCGT CATCGCCGAC
GGCCTCACGC GCGCCCTGGC ACAGGTGAAG AAGGGGTTCT GA
 
Protein sequence
MASGNISAHP DGLDPATMDR PVYSAVIRPH QSLSQDGFRI VMGLCCLVSL VTSIACWRAG 
FWPIAGFFGL DMLALYVALK VSFRRGRSFE EVAISPIEVF LARIDPRGVR REWRFNPLWT
KLSRVDDEEF GLRTLTLTSR REHVVVARDA SPDQRAVIAD GLTRALAQVK KGF