Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3783 |
Symbol | |
ID | 4785952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 4002778 |
End bp | 4003197 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640092366 |
Product | hypothetical protein |
Protein accession | YP_001022971 |
Protein GI | 124268967 |
COG category | [R] General function prediction only |
COG ID | [COG4113] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.873007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000213032 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCGGCGG TCGTGCTCGA TGCCTCGGCC GCGCTGGCGT GGTTGTCCGC CGATGCGCAG ACGCCGGCGT CCCGTGAACT CGCGCTCGAG GTGGCCCGCC ACGGCGCCGT GGTGCCGGAG ATCTGGCACG CCGAAGTCAC GCAGATCCTG CTGCTCGCCG AGCGGCGTGG CCGCACCACG AAGGGGCGTG TCGCCGAGAT CGTGGCGTTG CTCGACGAGC TGCCGATAGA GACCGAAGCC GGCGTGCCGC AGCGCATGCG GCACGAAGTG CTGGATCTGG CCCGCGACCG CGGCCTCAGC ACCTGCGACG CGCTCTACCT CGACCTCGCC CAGCGCCGCG GCCTGCCGCT TGCGACGCTG GACCCTGCCC TCGGCCGCGC AGCCCGCGCG GTGGGCGTTC CTGTCGCCCT CGGCGGCTGA
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Protein sequence | MAAVVLDASA ALAWLSADAQ TPASRELALE VARHGAVVPE IWHAEVTQIL LLAERRGRTT KGRVAEIVAL LDELPIETEA GVPQRMRHEV LDLARDRGLS TCDALYLDLA QRRGLPLATL DPALGRAARA VGVPVALGG
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