Gene Mpe_A3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3453 
SymbolrplJ 
ID4786270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3664032 
End bp3664556 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content67% 
IMG OID640092032 
Product50S ribosomal protein L10 
Protein accessionYP_001022641 
Protein GI124268637 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0925685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.446601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTCTGA ATCGCAACGA GAAAGAAGCC GTCGTGGCGC AGGTGTCGGC CCAGGTGGCC 
AAGGCACAGA CGCTGGCGCT GGCCGAGTAC CGCGGACTCA CGGTGGAACA CTTGAACGCG
CTGCGCAAGC AGGCGCGCGA GAAGGGCGTC TATCTTCACG TGCTGAAGAA CACGCTCGCT
CGCCGTGCCG TCGCTGGCAC CTCGTTCGAA GTGGCCGCCG GGAGCATGGC TGGCCCGCTG
ATCTACGGCT TCTCCGAAGA CGCTGTGGCA GCAGCCAAAG TCATCGCGGA CTTCGCAAAG
GGCAACGACA AGCTGGTGAT CAAGGCCGGC GCCTATGCCG GCAAGGCCCT GGACGCCGAG
GGCGTGAAGG CGCTGGCATC GATCCCGAGC AAGGAAGTGC TGCTGTCGCA GCTGCTGGGA
CTGATGCAGT CGCCGGTCTC GCGCATCGCG CGCGTACTGG CCGCGCTGGC CGAGCAGCGA
GGGGGGTCGG CGGAAGCCGC GCCCGCCGAG GCTGCCGCCG CCTGA
 
Protein sequence
MSLNRNEKEA VVAQVSAQVA KAQTLALAEY RGLTVEHLNA LRKQAREKGV YLHVLKNTLA 
RRAVAGTSFE VAAGSMAGPL IYGFSEDAVA AAKVIADFAK GNDKLVIKAG AYAGKALDAE
GVKALASIPS KEVLLSQLLG LMQSPVSRIA RVLAALAEQR GGSAEAAPAE AAAA