| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2924 |
|---|
| Symbol | |
|---|
| ID | 4784554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3108367 |
|---|
| End bp | 3108936 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640091495 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001022112 |
|---|
| Protein GI | 124268108 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGGCA CCATGCATCC ACCAACCCCC AACGACGACG GCGCGGCCAC CCTGGCGCGC
TGGCAGGCCG ACGAAGCCTC CGTCCGCGAA CGCAACCGGC GCTACGGCCT GAGCCGGCCG
GAACAGGTGG CCCCGTTGAG CGGCCAGCAG TTCTTCGACG CCGTGTTCGC TGGCGAGCTG
CCGCTGGCAC CGATCTTCGA GACCCTGGAC TTCGTGCCCA TCCACATGGC GCGCGGCGTG
GCGGTGTTCC AGGGCCGGCC GCTGGCGCGC CACTACAACC CCATGGGCAC GGTACATGGC
GGCTGGTTCG CGACGCTGCT CGACTCGGCC GTGGCGTGCG CAGTGCACAC GGCGCTGCCG
GCCGGCAAGA CCTACACGAC GGTGGAGCTG AAGATCAGCC TGGTGAAGGC GCTGACCGCG
AAGGTACCGC TGGTACGCGC CGAGGGCCGA CTGATCCACC TGGGTCGCAG CCTGGGCACC
GCCGACGGCC GCCTGGTCGG CCCCGACGGC ACGCTGTACG CTCACGCCTC GACCACCTGC
TTCGTCCTCG ACCGGCCCCC TTCCCCATGA
|
|---|
| Protein sequence | MHGTMHPPTP NDDGAATLAR WQADEASVRE RNRRYGLSRP EQVAPLSGQQ FFDAVFAGEL
PLAPIFETLD FVPIHMARGV AVFQGRPLAR HYNPMGTVHG GWFATLLDSA VACAVHTALP
AGKTYTTVEL KISLVKALTA KVPLVRAEGR LIHLGRSLGT ADGRLVGPDG TLYAHASTTC
FVLDRPPSP
|
|---|
| |