| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2160 |
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| Symbol | |
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| ID | 4785824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2315650 |
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| End bp | 2318262 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640090728 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_001021351 |
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| Protein GI | 124267347 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.12077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGAAC GAAAGAACCG CGTCGGGCAG GCTCGTGCAC CCAGAACACT GAACGCCGTC
GCTGTTGCAG CGCTGGCGGT TTGCGCCTGG ATGCCGATCG ACGCGGCGGC GCTCGGCTTG
GGGCGTCTGT CGGTTCAGTC CGCACTCGGG GAGGCGCTCC GGGCCGAGAT CGACGTCACC
GCACTCACGC CGGAAGAGGC TTCGAGCCTG AAGGTGAAGG TGGCGTCGCC CGACGCCTAC
CGTGCGGCCG GGGTCGACTA CAACGCAGCG CTGTCGGCGG CGAACGTGAC GCTGCAGCGG
CGCGCCGATG GCCGACCCTA CCTGCGACTG ACCGGCGATC GTCCGGTCGG CGAGCCCTTC
GTCGACGTCA TCCTCGAATT GAACTGGTCG TCGGGGCGCC TGGTGCGCGA GTTCACCATG
CTGTTCGACC CGCCGGCCAC GCGTGCCGCG GCGCCGGCAT CTGCACCGGC GGTCATCTCG
CCGGCGCCGT CGGCGGCGCC CGCCGTCGCG GCGCCGCTGC CGCCCCGCGC GGCCGCTCCC
GCCAGCCCGA ACGGGGCGGT TCCGGCCCCG GCCCCGGCCC CGGCCCCGGC CCCGGCTCCG
CGTCCGGCAC CGGCACCGGC ACCGGCACCG GCACCGGCAC CGGCACCGGC ACCGGCACCG
CGCGCTGCGG CGGCCGAGCC GGCTGGCACG GGTGCCGCGT CCGAGTACCG CGTCAAGGCG
GGTGACACGC TGTACCGCAT CGCCACTCGC ACGCAGCAGC CCGGCGTGTC GCTGGACCAG
ATGCTGGTGG CGCTCTATCG CAGCAACCCC GGCGCCTTCC TCGGCAACAA CATGAACCGG
CTCAAGGCCG GCGCCGTGCT CAATGTTCCG TCCGGTGAAG AGACCCAGGC CATCACGCCA
TCCGACGCCC GGCAGGTGAT CCAGGCGCAG AGCGCCGACT TCGGCGCCTA CCGTGCCAAG
CTCGCCGGTG GCGTGCCCAC TGCGGCCGCG CCCGACAGCA GCCGCTCTGC GGCGGGCAAG
GTGCAGGCGG ACGTGCAGGA CCGCAAGACG GCCGCTGGTG GTACGCCGGA CAAGCTGACC
TTGAGCAAGG GTGCGGTCGG TGCGAGCAAG CCGGGGCCGG AAGACCAGGT GGCCAAAGGC
CGCGAGCAGA AGGACAGCTC CACCCGTGTG GCCGAATTGG CCAAGAACGT CGAGGAACTG
AAGAAATTGC AGGGAGCGGC CGCGGCCGGT TCGGCGGCTT CAGCTGCGGT AGCCAAGCCG
GGGGTCAGCG TACCCGCGCC AGTGGTCGTC CCGCCGACGC CGCCGAAGCC CGCTCCTGCG
CCCGCACCAG TTCCCGCTCC GCCGCCGCCC GCGCCGGTCC CGCCCCCGGC TCCCGAGCCA
GCCCCTGCGC CGGCCCCTGT CCCCGCGCCC GCCCCGGCGC CCAGCCCGGA AGTGCCTCCG
GCGGTGGCTT CGGCACCCTC CGAGGCGCTG CCGGTCGCTG CTGCGCCAGC GTCGACGGCA
GCCAGCGAGC CGGCAACTGC CCCGGCACCG GCACCCAGCG CGGGCCCGAG CTTCCTCGAC
GGCTTGCTCG AGAACCCGTT GCTGCTGCCG GGTGTCGGCG TGCTGGTCGC GCTCCTCGCC
GGCTTCGGCT TCTACCGCAT GCGCCAGGGC AAGCGCGACA GCGGCGAGAC CTCGTTCCTC
GAAAGTCGCC TGCAGCCGGA TTCGTTCTTC GGTGCGAGTG GTGGGCAGCG CGTCGACACC
CGCGACGCGA CCGGCGTGCC GTCATCGATG AGCTACTCTC TGAGCCAGCT CGATGCGATC
GGCGACGTGG ACCCTGTGGC CGAGGCCGAT GTCTACCTGG CCTACGGCCG CGATCTGCAG
GCCGAAGAGA TCCTCAAGGA AGCGATGCGC TCGAGTCCGG AGCGCATGGC GATCCGGCTG
AAGCTGCTCG AGGTCTATGC GAAGCGCCGC GACACCAAGG GCTTCGAACT GCTCGCCACG
CAGCTCTATG CGCTGACCGG TGGCGAAGGC GAGGACTGGC TGCGCGCGCA GCAGCTCGGC
GCCGGCATCG ACCCCGAAAA CCCGCTGTTC CAGCCGGGCG GCCGCCCGCC CGGTGCGCCG
GTCGACGGCG GCGCCGTGGT GGAGGCGCTC GGCGCCAGCA CCATGCCGCA ATCGGTGTTG
CCGTCTCCGT CGCGCTTCGA TGCGCAGCGT TCGGAAATCC TCGAGGACCC AGGAGTCGAC
CTGGACCTGG ACGTGTCGGT GCCCGGCGCG CTCGACGAGA CCCCACGGCC TTCGGCACCG
GAGCGCACCC AGCCGCTGCC GGCCGCGGCG GCCCCGACCG CCTCGCCGGA CCTCGGGTTC
GACTTCGACC TGCCGTCCCT CTCGCTTGAC GATCCCAGCC AACCGGCTGT CTCCACCACC
GTGGCCGATG AGTCGCTGCC CGACCTCGGC AACTTCGATC TGCCGGGCGA CGAAGCGACC
GATGAGGCGC TGTCCCGCAA GCTCGAACTG GCGGAGGAGT TCCGCCAGAT CGGTGATCTC
GAAGGCGCCC GCGACCTGTT GCAGGAAGTC GTGGCGCAGT CCGGCGGCAC GCTCAAAGCC
AAGGCCCAGA GCATGCTGAA GGACATCGGC TGA
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| Protein sequence | MKERKNRVGQ ARAPRTLNAV AVAALAVCAW MPIDAAALGL GRLSVQSALG EALRAEIDVT
ALTPEEASSL KVKVASPDAY RAAGVDYNAA LSAANVTLQR RADGRPYLRL TGDRPVGEPF
VDVILELNWS SGRLVREFTM LFDPPATRAA APASAPAVIS PAPSAAPAVA APLPPRAAAP
ASPNGAVPAP APAPAPAPAP RPAPAPAPAP APAPAPAPAP RAAAAEPAGT GAASEYRVKA
GDTLYRIATR TQQPGVSLDQ MLVALYRSNP GAFLGNNMNR LKAGAVLNVP SGEETQAITP
SDARQVIQAQ SADFGAYRAK LAGGVPTAAA PDSSRSAAGK VQADVQDRKT AAGGTPDKLT
LSKGAVGASK PGPEDQVAKG REQKDSSTRV AELAKNVEEL KKLQGAAAAG SAASAAVAKP
GVSVPAPVVV PPTPPKPAPA PAPVPAPPPP APVPPPAPEP APAPAPVPAP APAPSPEVPP
AVASAPSEAL PVAAAPASTA ASEPATAPAP APSAGPSFLD GLLENPLLLP GVGVLVALLA
GFGFYRMRQG KRDSGETSFL ESRLQPDSFF GASGGQRVDT RDATGVPSSM SYSLSQLDAI
GDVDPVAEAD VYLAYGRDLQ AEEILKEAMR SSPERMAIRL KLLEVYAKRR DTKGFELLAT
QLYALTGGEG EDWLRAQQLG AGIDPENPLF QPGGRPPGAP VDGGAVVEAL GASTMPQSVL
PSPSRFDAQR SEILEDPGVD LDLDVSVPGA LDETPRPSAP ERTQPLPAAA APTASPDLGF
DFDLPSLSLD DPSQPAVSTT VADESLPDLG NFDLPGDEAT DEALSRKLEL AEEFRQIGDL
EGARDLLQEV VAQSGGTLKA KAQSMLKDIG
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