| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1998 |
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| Symbol | pilF |
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| ID | 4783785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2140421 |
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| End bp | 2141224 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640090568 |
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| Product | uncharacterized protein involved in fimbrial biogenesis |
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| Protein accession | YP_001021191 |
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| Protein GI | 124267187 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.151418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGGAC TGCTGCTGGC GACGCTGTTG TGTGGCGCGG TCTGGAGCGT TGCCCAGGCG
CAGGGCCGGC CCAACGACTT CGGCCGCAGC AGTTCCACCG CCGGTGCCGG CACGGACGAG
GAGTCCGACT CGGCGAAGCG CGCGCGCATC CGCCTCGACC TTGCGGGGGC CTATTTCTCC
GAGGGGCGTT TCGACAATGC CCTGTCGGAG GTGAAGCTGG CGCTGGCCGC CGACCCCAAT
CTGCCGCAGG CGCTGAACCT GCAAGGCCTG GTACTGGCCG CGCTGGGCGA GGAGCAGAAG
GCCGAGGACA GTTTCAAGCG CGCACTGCAG CTGGCATCCA CCGACGGCGA CGTGATGCAC
AACTACGGCT GGTTCCTGTG CCAGCGTGGC CGCTACCCGG AGGCGGGAAA GCTGTTCGAG
CGCGCCGTGG CGACGCCGCA GTACCGCACC CCGAACCGGA CTTTCCTGGT GCAGGGGATC
TGCGAGGCAC GCGCCGGCCA GCTGGACCTG GCCGAGCTGA CGCTCAAGCG CGCCTACGAA
CTCGAGCCGG CCAACCCGGC GATCGCGATG AACCTGGCCG ACGTGCTGTA CCGACGTGGC
GAGTACGAGC GGGCGCGCTT CTACGTGCGC CGCGTCAACA ACAACGCCGA GTTGCGCAGC
GCCGAGACGC TGTGGCTCGC CGCCCGCATC GAGAACCGCC TGGCCAATCC GCAGGGCGTT
CGCGATCTGG GCAACCAGCT GCGTGCGAGC TACCCCACGT CGCGCGAGGC GGCGTCGTTC
GAGCGGGGGA TGTTCGATGA GTGA
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| Protein sequence | MRGLLLATLL CGAVWSVAQA QGRPNDFGRS SSTAGAGTDE ESDSAKRARI RLDLAGAYFS
EGRFDNALSE VKLALAADPN LPQALNLQGL VLAALGEEQK AEDSFKRALQ LASTDGDVMH
NYGWFLCQRG RYPEAGKLFE RAVATPQYRT PNRTFLVQGI CEARAGQLDL AELTLKRAYE
LEPANPAIAM NLADVLYRRG EYERARFYVR RVNNNAELRS AETLWLAARI ENRLANPQGV
RDLGNQLRAS YPTSREAASF ERGMFDE
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